Regulatory network Genome size Network genomic coverage Data source Global regulators Modules Modular genes Basal machinery genes Intermodular genes Network global properties
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (2011, 2012, 2015)
(NCBI TaxID: 83332)
4091 76.6%
3134
21818301
22737072
25581030
89
2.84%
74 381
12.2%
2625
83.8%
39
1.24%
Link
Bacillus subtilis (strain 168) (DBTBS, SubtiWiki, 2015)
(NCBI TaxID: 224308)
4421 75.3%
3328
17962296
26433225
26577401
58
1.74%
136 1119
33.6%
2023
60.8%
128
3.85%
Link
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (All evidences)
(NCBI TaxID: 196627)
3138 73.3%
2301
22080556
27242034
4
0.17%
68 562
24.4%
1631
70.9%
104
4.52%
Link
Escherichia coli str. K-12 substr. MG1655 (RNA + All evidences)
(NCBI TaxID: 511145)
4497 72.8%
3276
23203884
18
0.55%
140 1166
35.6%
1873
57.2%
219
6.68%
Link
Escherichia coli str. K-12 substr. MG1655 (All evidences)
(NCBI TaxID: 511145)
4497 71.8%
3227
23203884
18
0.56%
114 1040
32.2%
1979
61.3%
190
5.89%
Link
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (Strong evidences)
(NCBI TaxID: 196627)
3138 70.8%
2223
22080556
27242034
4
0.18%
56 459
20.6%
1713
77.1%
47
2.11%
Link
Bacillus subtilis (strain 168) (2015)
(NCBI TaxID: 224308)
4421 69.8%
3085
26577401
135
4.38%
64 290
9.4%
2659
86.2%
1
0.03%
Link
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (2015)
(NCBI TaxID: 83332)
4091 62.1%
2541
25581030
62
2.44%
69 285
11.2%
2162
85.1%
32
1.26%
Link
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (2011, 2012)
(NCBI TaxID: 83332)
4091 43.7%
1786
21818301
22737072
35
1.96%
48 247
13.8%
1467
82.1%
37
2.07%
Link
Bacillus subtilis (strain 168) (SubtiWiki)
(NCBI TaxID: 224308)
4421 42.4%
1874
26433225
41
2.19%
99 533
28.4%
1295
69.1%
5
0.27%
Link
Escherichia coli str. K-12 substr. MG1655 (Strong Evidences)
(NCBI TaxID: 511145)
4497 42%
1889
23203884
14
0.74%
101 874
46.3%
895
47.4%
106
5.61%
Link
Bacillus subtilis (strain 168) (DBTBS, All evidences)
(NCBI TaxID: 224308)
4421 38.2%
1687
17962296
24
1.42%
86 689
40.8%
952
56.4%
22
1.3%
Link
Bacillus subtilis (strain 168) (DBTBS, Strong evidences)
(NCBI TaxID: 224308)
4421 31.8%
1408
17962296
15
1.07%
81 725
51.5%
615
43.7%
53
3.76%
Link
Staphylococcus aureus (strain USA300 / TCH1516)
(NCBI TaxID: 451516)
2844 24%
683
23547897
27
3.95%
23 151
22.1%
459
67.2%
46
6.73%
Link
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (2011)
(NCBI TaxID: 196627)
3138 23.6%
741
22080556
27242034
19
2.56%
60 315
42.5%
405
54.7%
2
0.27%
Link
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
(NCBI TaxID: 208964)
5697 15.9%
905
22587778
23547897
42
4.64%
51 226
25%
636
70.3%
1
0.11%
Link
Staphylococcus aureus (strain N315)
(NCBI TaxID: 158879)
2694 13.8%
372
23547897
12
3.23%
18 92
24.7%
256
68.8%
12
3.23%
Link
Staphylococcus aureus (strain Newman)
(NCBI TaxID: 426430)
2687 13.7%
367
23547897
11
3%
17 99
27%
246
67%
11
3%
Link
Staphylococcus aureus (strain COL)
(NCBI TaxID: 93062)
2726 13.6%
371
23547897
13
3.5%
17 93
25.1%
253
68.2%
12
3.23%
Link
Staphylococcus aureus (strain Mu3 / ATCC 700698)
(NCBI TaxID: 418127)
2768 13.5%
374
23547897
16
4.28%
15 73
19.5%
277
74.1%
8
2.14%
Link
Staphylococcus aureus (strain Mu50 / ATCC 700699)
(NCBI TaxID: 158878)
2806 13.4%
375
23547897
16
4.27%
16 75
20%
276
73.6%
8
2.13%
Link
Staphylococcus aureus (strain JH9)
(NCBI TaxID: 359786)
2847 13.1%
372
23547897
13
3.49%
18 91
24.5%
257
69.1%
11
2.96%
Link
Staphylococcus aureus (strain MW2)
(NCBI TaxID: 196620)
2703 13%
351
23547897
11
3.13%
14 91
25.9%
238
67.8%
11
3.13%
Link
Staphylococcus aureus (strain JH1)
(NCBI TaxID: 359787)
2906 12.9%
375
23547897
13
3.47%
18 90
24%
261
69.6%
11
2.93%
Link
Staphylococcus aureus (strain MSSA476)
(NCBI TaxID: 282459)
2738 12.9%
353
23547897
12
3.4%
16 85
24.1%
246
69.7%
10
2.83%
Link
Staphylococcus aureus (strain USA300)
(NCBI TaxID: 367830)
2950 12.5%
368
23547897
13
3.53%
18 99
26.9%
245
66.6%
11
2.99%
Link
Staphylococcus aureus (strain bovine RF122 / ET3-1)
(NCBI TaxID: 273036)
2663 11.5%
306
23547897
18
5.88%
13 49
16%
236
77.1%
3
0.98%
Link
Staphylococcus aureus (strain MRSA252)
(NCBI TaxID: 282458)
2834 9.8%
278
23547897
8
2.88%
16 81
29.1%
180
64.7%
9
3.24%
Link
Streptococcus pyogenes serotype M5 (strain Manfredo)
(NCBI TaxID: 160491)
1906 9%
172
23547897
11
6.4%
7 27
15.7%
133
77.3%
1
0.58%
Link
Streptococcus pyogenes serotype M18 (strain MGAS8232)
(NCBI TaxID: 186103)
1924 8.9%
171
23547897
11
6.43%
7 29
17%
131
76.6%
0
0%
Link
Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
(NCBI TaxID: 198466)
1951 8.5%
165
23547897
12
7.27%
5 16
9.7%
136
82.4%
1
0.61%
Link
Streptococcus pneumoniae (strain Hungary19A-6)
(NCBI TaxID: 487214)
2402 8.5%
203
23547897
17
8.37%
4 17
8.4%
169
83.3%
0
0%
Link
Streptococcus pneumoniae SP9-BS68
(NCBI TaxID: 406558)
2432 8.3%
202
23547897
10
4.95%
8 45
22.3%
144
71.3%
3
1.49%
Link
Streptococcus pyogenes serotype M28 (strain MGAS6180)
(NCBI TaxID: 319701)
1977 8.2%
162
23547897
10
6.17%
6 20
12.3%
131
80.9%
1
0.62%
Link
Streptococcus pyogenes serotype M4 (strain MGAS10750)
(NCBI TaxID: 370554)
2059 8%
164
23547897
10
6.1%
7 28
17.1%
125
76.2%
1
0.61%
Link
Streptococcus pyogenes serotype M12 (strain MGAS9429)
(NCBI TaxID: 370551)
1962 8%
156
23547897
8
5.13%
7 34
21.8%
114
73.1%
0
0%
Link
Streptococcus pyogenes serotype M2 (strain MGAS10270)
(NCBI TaxID: 370552)
2068 7.7%
159
23547897
9
5.66%
7 23
14.5%
125
78.6%
2
1.26%
Link
Escherichia coli str. K-12 substr. DH10B
(NCBI TaxID: 316385)
4352 7%
304
23547897
16
5.26%
31 125
41.1%
160
52.6%
3
0.99%
Link
Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)
(NCBI TaxID: 481805)
4408 6.9%
306
23547897
16
5.23%
31 124
40.5%
163
53.3%
3
0.98%
Link
Escherichia coli O9:H4 (strain HS)
(NCBI TaxID: 331112)
4626 6.4%
297
23547897
15
5.05%
31 120
40.4%
159
53.5%
3
1.01%
Link
Escherichia coli O139:H28 (strain E24377A / ETEC)
(NCBI TaxID: 331111)
5258 5.6%
296
23547897
15
5.07%
30 125
42.2%
153
51.7%
3
1.01%
Link
Escherichia coli B171
(NCBI TaxID: 344601)
5092 5.5%
279
23547897
15
5.38%
27 100
35.8%
163
58.4%
1
0.36%
Link
Escherichia coli O6:K15:H31 (strain 536 / UPEC)
(NCBI TaxID: 362663)
4779 5.4%
259
23547897
13
5.02%
26 101
39%
142
54.8%
3
1.16%
Link
Escherichia coli (strain UTI89 / UPEC)
(NCBI TaxID: 364106)
5272 5%
266
23547897
15
5.64%
25 97
36.5%
151
56.8%
3
1.13%
Link
Escherichia coli O157:H7 (strain EC869)
(NCBI TaxID: 478008)
5224 5%
263
23547897
13
4.94%
28 101
38.4%
146
55.5%
3
1.14%
Link
Escherichia coli (strain SMS-3-5 / SECEC)
(NCBI TaxID: 439855)
5127 5%
256
23547897
12
4.69%
24 116
45.3%
128
50%
0
0%
Link
Escherichia coli O1:K1 / APEC
(NCBI TaxID: 405955)
4968 5%
247
23547897
13
5.26%
25 93
37.7%
138
55.9%
3
1.21%
Link
Escherichia coli CFT073
(NCBI TaxID: 199310)
5574 4.6%
256
23547897
15
5.86%
27 95
37.1%
144
56.3%
2
0.78%
Link
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
(NCBI TaxID: 100226)
8299 3.7%
311
23547897
33
10.61%
23 51
16.4%
226
72.7%
1
0.32%
Link
Streptococcus pyogenes serotype M1
(NCBI TaxID: 301447)
5713 2.9%
164
23547897
12
7.32%
4 12
7.3%
139
84.8%
1
0.61%
Link
Escherichia coli B7A
(NCBI TaxID: 340184)
10051 2.9%
287
23547897
16
5.57%
27 96
33.4%
172
59.9%
3
1.05%
Link
Pseudomonas aeruginosa (strain PA7)
(NCBI TaxID: 381754)
6369 2%
125
23547897
13
10.4%
8 18
14.4%
93
74.4%
1
0.8%
Link