Bacillus subtilis (strain 168) (SubtiWiki)

Annotated modules (73%)
Module 1.1Genes 13
GO termDescriptionq-value
GO:0042128 Nitrate assimilation 2.427829e-11
GO:0006779 Porphyrin-containing compound biosynthetic process 2.472837e-3
Module 1.2Genes 1
GO termDescriptionq-value
GO:0045151 Acetoin biosynthetic process 1.476955e-2
Module 1.3Genes 8
GO termDescriptionq-value
GO:0006869 Lipid transport 1.870044e-2
Module 2Genes 14
GO termDescriptionq-value
GO:0006810 Transport 1.234353e-2
GO:0000160 Phosphorelay signal transduction system 4.657461e-2
Module 3Genes 13
GO termDescriptionq-value
GO:0006865 Amino acid transport 2.416887e-6
Module 4Genes 13
GO termDescriptionq-value
GO:0019569 L-arabinose catabolic process to xylulose 5-phosphate 1.655071e-5
GO:0008643 Carbohydrate transport 3.467128e-5
GO:0031222 Arabinan catabolic process 5.143481e-5
GO:0046373 L-arabinose metabolic process 8.019213e-4
Module 5Genes 13
GO termDescriptionq-value
GO:0019310 Inositol catabolic process 2.093214e-12
Module 6Genes 12
GO termDescriptionq-value
GO:0006355 Regulation of transcription, DNA-templated 2.181856e-2
Module 7Genes 11
GO termDescriptionq-value
GO:0019076 Viral release from host cell 6.043187e-5
GO:0006323 DNA packaging 6.043187e-5
Module 8Genes 10
GO termDescriptionq-value
GO:0042732 D-xylose metabolic process 1.025870e-5
GO:0046177 D-gluconate catabolic process 5.646912e-4
GO:0019521 D-gluconate metabolic process 5.646912e-4
GO:0006098 Pentose-phosphate shunt 6.117144e-3
Module 9Genes 10
GO termDescriptionq-value
GO:0006281 DNA repair 2.263452e-2
GO:0006662 Glycerol ether metabolic process 4.948302e-2
Module 10Genes 10
GO termDescriptionq-value
GO:0046677 Response to antibiotic 1.294306e-2
Module 11Genes 10
GO termDescriptionq-value
GO:0006064 Glucuronate catabolic process 4.022192e-4
Module 12Genes 10
GO termDescriptionq-value
GO:0006633 Fatty acid biosynthetic process 2.286342e-10
GO:0008654 Phospholipid biosynthetic process 2.792522e-3
Module 13Genes 10
GO termDescriptionq-value
GO:0000160 Phosphorelay signal transduction system 7.910137e-3
Module 14Genes 9
GO termDescriptionq-value
GO:0006457 Protein folding 4.293865e-7
Module 15Genes 9
GO termDescriptionq-value
GO:0006829 Zinc ion transport 6.043187e-5
Module 16Genes 9
GO termDescriptionq-value
GO:0006810 Transport 2.125150e-4
Module 17Genes 8
GO termDescriptionq-value
GO:0019439 Aromatic compound catabolic process 2.225784e-9
GO:0009636 Response to toxic substance 1.087425e-8
Module 18Genes 8
GO termDescriptionq-value
GO:0015774 Polysaccharide transport 3.489202e-5
GO:0000272 Polysaccharide catabolic process 3.489202e-5
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 2.699588e-3
Module 19Genes 8
GO termDescriptionq-value
GO:0009102 Biotin biosynthetic process 2.907242e-13
GO:0006464 Cellular protein modification process 4.948302e-2
Module 20Genes 8
GO termDescriptionq-value
GO:0006525 Arginine metabolic process 8.721725e-13
Module 22Genes 8
GO termDescriptionq-value
GO:0006096 Glycolytic process 6.060741e-3
GO:0019605 Butyrate metabolic process 3.827352e-2
Module 26Genes 7
GO termDescriptionq-value
GO:0042838 D-glucarate catabolic process 1.594730e-4
Module 27Genes 7
GO termDescriptionq-value
GO:0019285 Glycine betaine biosynthetic process from choline 2.870514e-4
GO:0006865 Amino acid transport 1.608000e-3
Module 28Genes 6
GO termDescriptionq-value
GO:0009435 NAD biosynthetic process 3.756900e-6
Module 29Genes 6
GO termDescriptionq-value
GO:0071555 Cell wall organization 4.948302e-2
Module 30Genes 6
GO termDescriptionq-value
GO:0005975 Carbohydrate metabolic process 2.640128e-2
GO:0006810 Transport 4.948302e-2
Module 31Genes 6
GO termDescriptionq-value
GO:0006096 Glycolytic process 1.087425e-8
GO:0006094 Gluconeogenesis 4.410194e-2
GO:0006006 Glucose metabolic process 4.410194e-2
Module 32Genes 6
GO termDescriptionq-value
GO:0006635 Fatty acid beta-oxidation 2.770919e-5
Module 33Genes 6
GO termDescriptionq-value
GO:0019439 Aromatic compound catabolic process 1.019327e-4
GO:0009636 Response to toxic substance 2.072918e-4
Module 34Genes 6
GO termDescriptionq-value
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 4.293865e-7
Module 35Genes 6
GO termDescriptionq-value
GO:0030001 Metal ion transport 2.208087e-4
GO:0006811 Ion transport 1.574020e-2
Module 36Genes 6
GO termDescriptionq-value
GO:0008643 Carbohydrate transport 5.121391e-3
Module 37Genes 6
GO termDescriptionq-value
GO:0045490 Pectin catabolic process 1.464994e-4
Module 38Genes 5
GO termDescriptionq-value
GO:0006094 Gluconeogenesis 3.307103e-2
GO:0006006 Glucose metabolic process 3.307103e-2
Module 39Genes 5
GO termDescriptionq-value
GO:0006814 Sodium ion transport 2.792522e-3
GO:0055085 Transmembrane transport 3.307103e-2
GO:0009605 Response to external stimulus 3.827352e-2
GO:0006108 Malate metabolic process 3.827352e-2
Module 41Genes 5
GO termDescriptionq-value
GO:0006099 Tricarboxylic acid cycle 1.703359e-6
GO:0044262 Cellular carbohydrate metabolic process 1.136886e-3
GO:0006108 Malate metabolic process 3.827352e-2
Module 42Genes 5
GO termDescriptionq-value
GO:0055072 Iron ion homeostasis 1.019327e-4
GO:0006811 Ion transport 1.127032e-4
Module 43Genes 5
GO termDescriptionq-value
GO:0006825 Copper ion transport 8.933996e-6
Module 45Genes 5
GO termDescriptionq-value
GO:0043419 Urea catabolic process 1.106331e-6
Module 46Genes 5
GO termDescriptionq-value
GO:0071555 Cell wall organization 2.617232e-3
Module 48Genes 5
GO termDescriptionq-value
GO:0045150 Acetoin catabolic process 8.975012e-8
Module 49Genes 5
GO termDescriptionq-value
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 1.405750e-5
Module 50Genes 5
GO termDescriptionq-value
GO:0017000 Antibiotic biosynthetic process 2.072918e-4
GO:0016311 Dephosphorylation 3.827352e-2
Module 52Genes 4
GO termDescriptionq-value
GO:0006865 Amino acid transport 6.837266e-3
Module 54Genes 4
GO termDescriptionq-value
GO:0019262 N-acetylneuraminate catabolic process 1.043823e-4
GO:0005975 Carbohydrate metabolic process 1.739355e-2
Module 58Genes 4
GO termDescriptionq-value
GO:0010133 Proline catabolic process to glutamate 1.043823e-4
GO:0006537 Glutamate biosynthetic process 3.827352e-2
Module 59Genes 4
GO termDescriptionq-value
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 7.367013e-3
Module 60Genes 4
GO termDescriptionq-value
GO:0006089 Lactate metabolic process 1.043823e-4
Module 61Genes 4
GO termDescriptionq-value
GO:0006824 Cobalt ion transport 1.446740e-7
GO:0006813 Potassium ion transport 6.043187e-5
GO:0006829 Zinc ion transport 5.646912e-4
Module 62Genes 4
GO termDescriptionq-value
GO:0019439 Aromatic compound catabolic process 5.143481e-5
GO:0009636 Response to toxic substance 1.019327e-4
Module 63Genes 4
GO termDescriptionq-value
GO:0046685 Response to arsenic-containing substance 4.701906e-7
Module 64Genes 4
GO termDescriptionq-value
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 2.732742e-4
Module 65Genes 3
GO termDescriptionq-value
GO:0097054 L-glutamate biosynthetic process 6.043187e-5
Module 67Genes 3
GO termDescriptionq-value
GO:0009605 Response to external stimulus 1.870044e-2
GO:0006101 Citrate metabolic process 1.870044e-2
Module 71Genes 3
GO termDescriptionq-value
GO:0005975 Carbohydrate metabolic process 9.403523e-3
Module 72Genes 3
GO termDescriptionq-value
GO:0019344 Cysteine biosynthetic process 2.548781e-4
GO:0000103 Sulfate assimilation 5.646912e-4
GO:0070814 Hydrogen sulfide biosynthetic process 9.710434e-4
Module 73Genes 3
GO termDescriptionq-value
GO:0019647 Formaldehyde assimilation via ribulose monophosphate cycle 6.043187e-5
GO:0009636 Response to toxic substance 3.551466e-3
GO:0005975 Carbohydrate metabolic process 9.403523e-3
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 4.410194e-2
Module 74Genes 3
GO termDescriptionq-value
GO:0006810 Transport 1.987488e-2
Module 75Genes 3
GO termDescriptionq-value
GO:0046677 Response to antibiotic 2.472837e-3
GO:0006810 Transport 1.987488e-2
Module 76Genes 3
GO termDescriptionq-value
GO:0006281 DNA repair 4.353518e-3
GO:0006284 Base-excision repair 2.645205e-2
Module 77Genes 3
GO termDescriptionq-value
GO:0006520 Cellular amino acid metabolic process 4.410194e-2
Module 78Genes 3
GO termDescriptionq-value
GO:0042744 Hydrogen peroxide catabolic process 3.686346e-2
Module 79Genes 3
GO termDescriptionq-value
GO:0009450 Gamma-aminobutyric acid catabolic process 1.464994e-4
Module 81Genes 3
GO termDescriptionq-value
GO:0006814 Sodium ion transport 9.710434e-4
Module 82Genes 3
GO termDescriptionq-value
GO:0045893 Positive regulation of transcription, DNA-templated 3.307103e-2
Module 85Genes 2
GO termDescriptionq-value
GO:0046685 Response to arsenic-containing substance 3.307103e-2
Module 89Genes 2
GO termDescriptionq-value
GO:0006355 Regulation of transcription, DNA-templated 3.098029e-2
Module 90Genes 2
GO termDescriptionq-value
GO:0044262 Cellular carbohydrate metabolic process 3.827352e-2
Module 94Genes 2
GO termDescriptionq-value
GO:0006633 Fatty acid biosynthetic process 4.182704e-2
Module 95Genes 2
GO termDescriptionq-value
GO:0006825 Copper ion transport 3.827352e-2
Not annotated modules
Module Genes
21 8
23 7
24 7
25 7
40 5
44 5
47 5
51 4
53 4
55 4
56 4
57 4
66 3
68 3
69 3
70 3
80 3
83 2
84 2
86 2
87 2
88 2
91 2
92 2
93 2
96 2
97 2