Bacillus subtilis (strain 168) (DBTBS, Strong evidences)

Annotated modules (72%)
Module 1.1Genes 108
GO termDescriptionq-value
GO:0000271 Polysaccharide biosynthetic process 8.116438e-11
GO:0015031 Protein transport 3.151718e-7
GO:0030435 Sporulation resulting in formation of a cellular spore 1.835679e-6
GO:0015833 Peptide transport 1.893146e-5
GO:0030152 Bacteriocin biosynthetic process 1.893146e-5
GO:0030420 Establishment of competence for transformation 1.458194e-3
GO:0030153 Bacteriocin immunity 2.957153e-3
GO:0030436 Asexual sporulation 2.957153e-3
GO:0042742 Defense response to bacterium 2.633452e-2
GO:0008356 Asymmetric cell division 2.633452e-2
GO:0030261 Chromosome condensation 2.633452e-2
Module 1.2Genes 69
GO termDescriptionq-value
GO:0006865 Amino acid transport 5.073527e-6
GO:0006782 Protoporphyrinogen IX biosynthetic process 3.517712e-5
GO:0006869 Lipid transport 2.633452e-2
Module 1.3Genes 18
GO termDescriptionq-value
GO:0042128 Nitrate assimilation 1.383710e-3
GO:0006355 Regulation of transcription, DNA-templated 4.842391e-2
Module 1.4Genes 16
GO termDescriptionq-value
GO:0042128 Nitrate assimilation 1.835679e-6
GO:0006457 Protein folding 7.063395e-4
Module 1.5Genes 9
GO termDescriptionq-value
GO:0045893 Positive regulation of transcription, DNA-templated 6.448533e-3
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 2.580198e-2
Module 1.6Genes 13
GO termDescriptionq-value
GO:0019556 Histidine catabolic process to glutamate and formamide 2.863335e-7
GO:0019557 Histidine catabolic process to glutamate and formate 2.863335e-7
GO:0015031 Protein transport 3.513853e-4
GO:0015833 Peptide transport 1.097773e-3
Module 1.7Genes 8
GO termDescriptionq-value
GO:0009229 Thiamine diphosphate biosynthetic process 9.617263e-12
GO:0009228 Thiamine biosynthetic process 2.231312e-9
Module 1.8Genes 6
GO termDescriptionq-value
GO:0019350 Teichoic acid biosynthetic process 3.969001e-5
GO:0071555 Cell wall organization 3.906149e-3
Module 1.11Genes 3
GO termDescriptionq-value
GO:0051289 Protein homotetramerization 2.003031e-2
GO:0006284 Base-excision repair 2.003031e-2
GO:0030497 Fatty acid elongation 2.003031e-2
Module 1.12Genes 1
GO termDescriptionq-value
GO:0006537 Glutamate biosynthetic process 1.562971e-2
Module 1.13Genes 4
GO termDescriptionq-value
GO:0006099 Tricarboxylic acid cycle 7.056967e-5
GO:0044262 Cellular carbohydrate metabolic process 9.003141e-4
GO:0006108 Malate metabolic process 3.379549e-2
Module 1.16Genes 1
GO termDescriptionq-value
GO:0006537 Glutamate biosynthetic process 1.562971e-2
Module 1.20Genes 6
GO termDescriptionq-value
GO:0006865 Amino acid transport 5.073527e-6
GO:0006782 Protoporphyrinogen IX biosynthetic process 3.517712e-5
GO:0006869 Lipid transport 2.633452e-2
Module 2Genes 62
GO termDescriptionq-value
GO:0030435 Sporulation resulting in formation of a cellular spore 7.736740e-24
GO:0051301 Cell division 3.958859e-3
GO:0007049 Cell cycle 5.653641e-3
GO:0009252 Peptidoglycan biosynthetic process 1.841091e-2
GO:0008360 Regulation of cell shape 2.271277e-2
Module 3Genes 35
GO termDescriptionq-value
GO:0006526 Arginine biosynthetic process 1.681626e-10
GO:0006525 Arginine metabolic process 2.375500e-8
GO:0045150 Acetoin catabolic process 2.524731e-4
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 8.471255e-4
GO:0006221 Pyrimidine nucleotide biosynthetic process 5.653641e-3
GO:0006096 Glycolytic process 4.750533e-2
Module 4Genes 31
GO termDescriptionq-value
GO:0009432 SOS response 2.445172e-12
GO:0006281 DNA repair 4.663870e-9
GO:0006289 Nucleotide-excision repair 2.107094e-4
GO:0006268 DNA unwinding involved in DNA replication 2.107094e-4
GO:0006310 DNA recombination 1.383710e-3
GO:0032776 DNA methylation on cytosine 2.273020e-3
GO:0009307 DNA restriction-modification system 2.273020e-3
GO:0006260 DNA replication 3.906149e-3
GO:0006200 Obsolete ATP catabolic process 2.347732e-2
GO:0007059 Chromosome segregation 2.347732e-2
GO:0006265 DNA topological change 4.495257e-2
Module 5Genes 23
GO termDescriptionq-value
GO:0000162 Tryptophan biosynthetic process 3.533978e-8
GO:0046656 Folic acid biosynthetic process 1.598153e-7
GO:0046654 Tetrahydrofolate biosynthetic process 1.598153e-7
GO:0006353 DNA-templated transcription, termination 1.562971e-2
Module 6Genes 15
GO termDescriptionq-value
GO:0006635 Fatty acid beta-oxidation 1.878034e-12
GO:0055114 Oxidation-reduction process 9.653303e-3
Module 7Genes 13
GO termDescriptionq-value
GO:0019569 L-arabinose catabolic process to xylulose 5-phosphate 1.893146e-5
GO:0031222 Arabinan catabolic process 1.893146e-5
GO:0008643 Carbohydrate transport 2.009389e-5
GO:0046373 L-arabinose metabolic process 9.811977e-4
Module 8Genes 13
GO termDescriptionq-value
GO:0019310 Inositol catabolic process 4.718537e-12
Module 9Genes 12
GO termDescriptionq-value
GO:0006281 DNA repair 4.127376e-2
Module 10Genes 11
GO termDescriptionq-value
GO:0006323 DNA packaging 6.395457e-5
GO:0019076 Viral release from host cell 6.395457e-5
Module 11Genes 10
GO termDescriptionq-value
GO:0006064 Glucuronate catabolic process 4.832686e-4
Module 12Genes 10
GO termDescriptionq-value
GO:0044205 'de novo' UMP biosynthetic process 4.900412e-16
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 1.184482e-5
Module 13Genes 9
GO termDescriptionq-value
GO:0000160 Phosphorelay signal transduction system 3.248359e-3
Module 14Genes 9
GO termDescriptionq-value
GO:0006633 Fatty acid biosynthetic process 2.622047e-13
GO:0008654 Phospholipid biosynthetic process 4.222505e-3
Module 15Genes 9
GO termDescriptionq-value
GO:0030420 Establishment of competence for transformation 6.590584e-11
GO:0006810 Transport 3.140859e-4
Module 16Genes 8
GO termDescriptionq-value
GO:0042732 D-xylose metabolic process 6.062509e-6
GO:0046177 D-gluconate catabolic process 4.584955e-4
GO:0019521 D-gluconate metabolic process 4.584955e-4
GO:0006098 Pentose-phosphate shunt 2.268873e-3
Module 17Genes 8
GO termDescriptionq-value
GO:0009102 Biotin biosynthetic process 6.881200e-13
Module 18Genes 7
GO termDescriptionq-value
GO:0006829 Zinc ion transport 8.366294e-6
Module 20Genes 6
GO termDescriptionq-value
GO:0006096 Glycolytic process 1.008133e-7
GO:0006006 Glucose metabolic process 4.650889e-2
Module 21Genes 6
GO termDescriptionq-value
GO:0006426 Glycyl-tRNA aminoacylation 2.755766e-5
Module 22Genes 6
GO termDescriptionq-value
GO:0009114 Hypoxanthine catabolic process 4.399599e-11
Module 23Genes 6
GO termDescriptionq-value
GO:0006810 Transport 3.517712e-5
Module 24Genes 6
GO termDescriptionq-value
GO:0030001 Metal ion transport 2.648119e-4
GO:0006811 Ion transport 1.562971e-2
Module 25Genes 5
GO termDescriptionq-value
GO:0006006 Glucose metabolic process 3.379549e-2
GO:0006094 Gluconeogenesis 4.650889e-2
GO:0008295 Spermidine biosynthetic process 4.650889e-2
Module 26Genes 5
GO termDescriptionq-value
GO:0006814 Sodium ion transport 1.403952e-3
GO:0055085 Transmembrane transport 1.407025e-2
GO:0006108 Malate metabolic process 4.100837e-2
Module 27Genes 5
GO termDescriptionq-value
GO:0006865 Amino acid transport 5.236026e-3
Module 29Genes 5
GO termDescriptionq-value
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 5.222957e-6
Module 30Genes 4
GO termDescriptionq-value
GO:0006355 Regulation of transcription, DNA-templated 8.750083e-3
GO:0006351 Transcription, DNA-templated 2.960842e-2
Module 31Genes 4
GO termDescriptionq-value
GO:0009401 Phosphoenolpyruvate-dependent sugar phosphotransferase system 1.557485e-4
Module 32Genes 4
GO termDescriptionq-value
GO:0009264 Deoxyribonucleotide catabolic process 2.633452e-2
Module 34Genes 4
GO termDescriptionq-value
GO:0006412 Translation 3.541365e-4
Module 35Genes 4
GO termDescriptionq-value
GO:0006310 DNA recombination 3.028806e-2
Module 36Genes 4
GO termDescriptionq-value
GO:0006071 Glycerol metabolic process 4.787204e-6
GO:0006072 Glycerol-3-phosphate metabolic process 1.189331e-4
GO:0019563 Glycerol catabolic process 1.189331e-4
GO:0031564 Transcription antitermination 3.379549e-2
Module 37Genes 4
GO termDescriptionq-value
GO:0046685 Response to arsenic-containing substance 1.598153e-7
Module 39Genes 3
GO termDescriptionq-value
GO:0035999 Tetrahydrofolate interconversion 2.633452e-2
Module 42Genes 3
GO termDescriptionq-value
GO:0005975 Carbohydrate metabolic process 3.438311e-3
Module 43Genes 3
GO termDescriptionq-value
GO:0000103 Sulfate assimilation 6.395457e-5
GO:0019344 Cysteine biosynthetic process 6.395457e-5
GO:0070814 Hydrogen sulfide biosynthetic process 6.395457e-5
Module 44Genes 3
GO termDescriptionq-value
GO:0009605 Response to external stimulus 2.633452e-2
Module 46Genes 3
GO termDescriptionq-value
GO:0006281 DNA repair 5.236026e-3
GO:0006284 Base-excision repair 2.633452e-2
GO:0006289 Nucleotide-excision repair 4.650889e-2
Module 48Genes 3
GO termDescriptionq-value
GO:0006012 Galactose metabolic process 2.633452e-2
Module 49Genes 3
GO termDescriptionq-value
GO:0045151 Acetoin biosynthetic process 1.598153e-7
Module 50Genes 3
GO termDescriptionq-value
GO:0009450 Gamma-aminobutyric acid catabolic process 1.722384e-4
Module 52Genes 3
GO termDescriptionq-value
GO:0006814 Sodium ion transport 4.100837e-2
Module 54Genes 2
GO termDescriptionq-value
GO:0009605 Response to external stimulus 2.633452e-2
Module 56Genes 2
GO termDescriptionq-value
GO:0044262 Cellular carbohydrate metabolic process 4.100837e-2
Module 57Genes 2
GO termDescriptionq-value
GO:0006979 Response to oxidative stress 2.633452e-2
Not annotated modules
Module Genes
1.9 4
1.10 3
1.14 1
1.15 6
1.17 1
1.18 1
1.19 4
1.21 1
19 7
28 5
33 4
38 3
40 3
41 3
45 3
47 3
51 3
53 2
55 2
58 2
59 2
60 2
61 2