Escherichia coli str. K-12 substr. MG1655 (Strong Evidences)

Modular genes
Gene Product description NDA class
aceE subunit of E1p component of pyruvate dehydrogenase complex 1.21
aceF AceF 1.21
acnA aconitate hydratase 1 1.2
acrD AcrAD-TolC multidrug efflux system - permease subunit 1.1
ada Ada DNA-binding transcriptional dual regulator 35
adhE AdhE 1.1
adiA Adi 1.1
adiC AdiC 1.1
adiY AdiY DNA-binding transcriptional activator 1.1
adrA predicted diguanylate cyclase 1.1
aer aerotaxis sensor receptor, flavoprotein 1.1
agaA predicted truncated N-acetylgalactosamine-6-phosphate deacetylase 7
agaB galactosamine PTS permease (cryptic) - AgaB subunit 7
agaC galactosamine PTS permease (cryptic) - AgaC subunit 7
agaD galactosamine PTS permease (cryptic) - AgaD subunit 7
agaI predicted galactosamine-6-phosphate isomerase 7
agaR AgaR DNA-binding transcriptional repressor 7
agaS putative tagatose-6-phosphate aldose/ketose isomerase 7
agaV N-acetyl-D-galactosamine PTS permease (cryptic) - AgaV subunit 7
agaW N-acetyl-D-galactosamine PTS permease (cryptic) - AgaW subunit (pseudogene) 7
ahpC alkyl hydroperoxide reductase, AhpC component 1.10
ahpF AhpF component 1.10
aidB AidB 35
alaC glutamate-pyruvate aminotransferase 12
aldA AldA 2
alkA 3-methyl-adenine DNA glycosylase II, inducible 35
alkB AlkB repair system for alkylated DNA and RNA 35
allA ureidoglycolate lyase 9
allB allantoinase monomer 9
allR AllR DNA-binding transcriptional repressor 9
allS AllS transcriptional activator 9
araA L-arabinose isomerase monomer 11
araB L-ribulokinase monomer 11
araC AraC 11
araD L-ribulose 5-phosphate 4-epimerase monomer 11
araE arabinose:H+ symporter 11
araF arabinose ABC transporter - periplasmic binding protein 11
araG arabinose ABC transporter - ATP binding subunit 11
araH arabinose ABC transporter - membrane subunit 11
araJ putative transport protein 11
argA ArgA 1.16
argB acetylglutamate kinase monomer 1.16
argC N-acetylglutamylphosphate reductase 1.16
argD ArgD 1.16
argE ArgE 1.16
argF ArgF 1.16
argG ArgG 1.16
argH argininosuccinate lyase 1.16
argI ArgI 1.16
argO arginine export protein 2
argP ArgP transcriptional activator 2
argR ArgR 1.16
ariR regulator of acid resistance, influenced by indole 29
aroF AroF 1.26
aroH AroH 1.24
aroP aromatic amino acid:H+ symporter AroP 1.26
arsB ArsB 55
arsC arsenate reductase 55
arsR ArsR 55
artI periplasmic binding protein ArtI 1.16
artJ L-arginine ABC transporter - periplasmic binding protein 1.16
artM L-arginine ABC transporter - membrane subunit 1.16
artP L-arginine ABC transporter - ATP binding subunit 1.16
artQ L-arginine ABC transporter - membrane subunit 1.16
ascB 6-phospho-β-glucosidase; cryptic 23
ascF AscF 23
ascG AscG DNA-binding transcriptional repressor 23
aslB predicted anaerobic sulfatase maturation enzyme 1.1
asr acid shock protein 1.1
atoA acetyl-CoA:acetoacetyl-CoA transferase, β subunit 32
atoB AtoB 32
atoC AtoC transcriptional activator; Az protein inhibitor of ODC 32
atoD acetyl-CoA:acetoacetyl-CoA transferase, α subunit 32
atoE predicted short chain fatty acid transporter 32
b1016 -- 1.1
b2083 -- 1.1
b3171 -- 1.16
b4431 -- 1.1
b4441 -- 64
b4443 -- 31
b4458 -- 1.10
b4577 -- 12
baeR BaeR transcriptional regulator 1.1
baeS BaeS sensory histidine kinase 1.1
basR BasR transcriptional regulator 1.1
bdm biofilm-dependent modulation protein 1.1
bglB 6-phospho-β-glucosidase B; cryptic 1.1
bglF BglF 1.1
bglG BglG transcriptional antiterminator (monomer) 1.1
bglJ BglJ DNA-binding transcriptional regulator 1.1
bhsA outer membrane protein involved in copper permeability, stress resistance and biofilm formation 62
bioA adenosylmethionine-8-amino-7-oxononanoate aminotransferase monomer 25
bioB biotin synthase monomer 25
bioC malonyl-[acp] methyltransferase 25
bioD1 -- 25
bioF 8-amino-7-oxononanoate synthase monomer 25
birA bifunctional biotin-[acetyl-CoA-carboxylase] ligase and transcriptional repressor 25
bluR BluR DNA-binding transcriptional repressor 29
bolA BolA DNA-binding transcriptional dual regulator 1.1
borD bacteriophage lambda Bor protein homolog 1.1
btuB vitamin B12 / E colicin / bacteriophage BF23 outer membrane porin BtuB 1.1
cadA CadA 1.1
cadB cadaverine:H+ symporter/lysine:cadaverine antiporter 1.1
cadC CadC DNA-binding transcriptional activator 1.1
caiA crotonobetainyl-CoA reductase 8
caiB CaiB monomer 8
caiC carnitine-CoA ligase 8
caiD crotonobetainyl-CoA hydratase 8
caiE predicted acyl transferase 8
caiF CaiF 8
caiT -- 8
cas1 multifunctional nuclease 1.1
cas2 predicted endoribonuclease 1.1
casA Cascade subunit A 1.1
casB Cascade subunit B 1.1
casC Cascade subunit C 1.1
casD Cascade subunit D 1.1
casE crRNA endonuclease 1.1
cbl Cbl DNA-binding transcriptional activator 5
cdd Cdd 1.33
chbA chitobiose PTS permease - ChbA subunit 1.5
chbB chitobiose PTS permease - ChbB subunit 1.5
chbC chitobiose PTS permease - ChbC subunit 1.5
chbF monoacetylchitobiose-6-phosphate hydrolase 1.5
chbG chito-oligosaccharide mono-deacetylase 1.5
chbR ChbR DNA-binding transcriptional dual regulator 1.5
cheA CheA(S) 1.1
cheB CheB 1.1
cheR chemotaxis protein methyltransferase/chemotaxis protein methyltransferase/chemotaxis protein methyltransferase/chemotaxis protein methyltransferase/chemotaxis protein methyltransferase 1.1
cheW CheW 1.1
cheY chemotaxis regulator transmitting signal to flagellar motor component 1.1
cheZ CheZ 1.1
citC citrate lyase synthetase 3
citD citrate lyase, acyl carrier γ subunit 3
citE citrate lyase, citryl-ACP lyase β subunit 3
citF citrate lyase, citrate-ACP transferase α subunit 3
citG triphosphoribosyl-dephospho-CoA synthase 3
citX apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 3
codA -- 54
codB cytosine transporter 54
comR ComR DNA-binding transcriptional repressor 62
copA Cu+ efflux ATPase 44
cpxA CpxA sensory histidine kinase 1.1
cpxP regulator of the Cpx response and possible chaperone involved in resistance to extracytoplasmic stress 1.1
cpxR CpxR transcriptional dual regulator 1.1
cra Cra DNA-binding transcriptional dual regulator 1.1
creB CreB transcriptional regulator 57
creD predicted inner membrane protein 57
csgA curlin, major subunit 1.1
csgB curlin, minor subunit 1.1
csgC putative curli production protein 1.1
csgD CsgD DNA-binding transcriptional dual regulator 1.1
csgE curli transport specificity factor 1.1
csgF curli assembly component 1.1
csgG curli secretion channel 1.1
cspD DNA replication inhibitor 41
cspE transcription antiterminator and regulator of RNA stability 42
cspI Qin prophage; cold shock protein 1.1
cueO multicopper oxidase with role in copper homeostasis 44
cueR CueR transcriptional dual regulator 44
cusA copper / silver efflux system - membrane subunit 28
cusB copper / silver efflux system - membrane fusion protein 28
cusC copper / silver efflux system - outer membrane porin 28
cusF copper / silver efflux system - periplasmic binding protein and metallochaperone 28
cusR CusR 28
cusS CusS sensory histidine kinase 28
cvpA membrane protein required for colicin V production 1.11
cynR CynR DNA-binding transcriptional repressor 36
cynS cyanase monomer 36
cynT carbonic anhydrase monomer 36
cynX cyanate transporter 36
cyoA cytochrome bo terminal oxidase subunit II 1.21
cyoB cytochrome bo terminal oxidase subunit I 1.21
cyoC cytochrome bo terminal oxidase subunit III 1.21
cyoD cytochrome bo terminal oxidase subunit IV 1.21
cyoE heme O synthase 1.21
cysA sulfate / thiosulfate ABC transporter - ATP binding subunit 5
cysB CysB 5
cysG CysG 1.12
cysK O-acetylserine sulfhydrylase A 5
cysM CysM 5
cysP sulfate / thiosulfate ABC transporter - periplasmic binding protein CysP 5
cysU sulfate / thiosulfate ABC transporter - membrane subunit 5
cysW sulfate / thiosulfate ABC transporter - membrane subunit 5
cytR CytR 1.33
dapB 4-hydroxy-tetrahydrodipicolinate reductase 2
dapD tetrahydrodipicolinate succinylase 2
dctA C4 dicarboxylate / orotate:H+ symporter 3
dctR predicted DNA-binding transcriptional regulator 1.1
dcuB dicarboxylate transporter DcuB 3
dcuR DcuR transcriptional activator 3
ddlB D-alanine-D-alanine ligase B 1.21
degP DegP 1.1
deoR DeoR DNA-binding transcriptional repressor 1.8
dgcZ diguanylate cyclase 1.1
dgkA DgkA 1.1
dinF DinF MATE Transporter 4
dinG ATP-dependent helicase 4
dinI DNA damage-inducible protein I 4
dinJ DinJ antitoxin of YafQ-DinJ toxin-antitoxin system and DNA-binding transcriptional repressor 42
dkgA methylglyoxal reductase/isobutyraldehyde reductase/β-keto ester reductase/2,5-diketo-D-gluconate reductase 46
dmsA dimethyl sulfoxide reductase, chain A 1.15
dmsB dimethyl sulfoxide reductase, chain B 1.15
dmsC dimethyl sulfoxide reductase, chain C 1.15
dnaA chromosomal replication initiator protein DnaA; DNA-binding transcriptional dual regulator 2
dnaG DNA primase 4
dnaN DnaN 2
dpiA DpiA 3
dpiB DpiB sensory histidine kinase 3
dsbA protein disulfide oxidoreductase - DsbAreduced 1.1
dsbG DsbGreduced 1.10
dtpA tripeptide / dipeptide:H+ symporter DtpA 1.1
ecpA E. coli common pilus - major subunit; cryptic 1.1
ecpR MatA DNA-binding transcriptional dual regulator 1.1
efeU_2 -- 1.1
emrA EmrAB-TolC multidrug efflux transport system - membrane fusion protein 53
emrB EmrAB-TolC multidrug efflux transport system - membrane subunit 53
emrK EmrKY-TolC multidrug efflux transport system - membrane fusion protein 1.1
emrY EmrKY putative multidrug efflux transporter - membrane subunit 1.1
eno Eno 1.1
envR EnvR DNA-binding transcriptional repressor 1.25
epd Epd 1.1
erpA essential respiratory protein A 1.20
evgA EvgA transcriptional regulator 1.1
evgS EvgS sensory histidine kinase 1.1
exuT hexuronate transporter 3
fabA FabA 1.28
fabR FabR DNA-binding transcriptional repressor 1.28
fadD FadD 1.3
fadE acyl-CoA dehydrogenase 1.3
fadH 2,4-dienoyl-CoA reductase 1.3
fadI FadI monomer 1.3
fadJ FadJ monomer 1.3
fadR FadR DNA-binding transcriptional dual regulator 1.3
fbaA fructose bisphosphate aldolase monomer 1.1
fdhF formate dehydrogenase H 1.19
fdnG formate dehydrogenase N, α subunit 1.12
fdnH formate dehydrogenase N, β subunit 1.12
fdnI formate dehydrogenase N, γ subunit 1.12
fecA ferric citrate outer membrane porin FecA 20
fecB ferric dicitrate ABC transporter - periplasmic binding protein 20
fecC ferric dicitrate ABC transporter - membrane subunit 20
fecD ferric dicitrate ABC transporter - membrane subunit 20
fecE ferric dicitrate ABC transporter - ATP binding subunit 20
fecI RNA polymerase, sigma 19 factor 20
fepB ferric enterobactin ABC transporter - periplasmic binding protein 1.1
fhlA FhlA transcriptional activator 1.19
fhuF hydroxamate siderophore iron reductase 1.10
fimE regulator for fimA 1.1
fixA predicted elecron transfer flavoprotein subunit, ETFP adenine nucleotide-binding domain 8
fixB predicted electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like 8
fixC flavoprotein (electron transport), possibly involved in anaerobic carnitine metabolism 8
fixX putative ferredoxin possibly involved in anaerobic carnitine metabolism 8
fldA flavodoxin 1 1.2
flgB flagellar basal-body rod protein FlgB 1.1
flgC flagellar basal-body rod protein FlgC 1.1
flgD flagellar biosynthesis, initiation of hook assembly 1.1
flgE flagellar hook protein FlgE 1.1
flgF flagellar basal-body rod protein FlgF 1.1
flgG flagellar basal-body rod protein FlgG 1.1
flgH flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein 1.1
flgI flagellar P-ring protein FlgI 1.1
flgJ FlgJ 1.1
flhA flagellar biosynthesis protein FlhA 1.1
flhB flagellar biosynthesis protein FlhB 1.1
flhC FlhC 1.1
flhD FlhD 1.1
flhE flagellar protein 1.1
fliA RNA polymerase, sigma 28 (sigma F) factor 1.1
fliC flagellar biosynthesis; flagellin, filament structural protein 1.1
fliD flagellar cap protein FliD; filament capping protein; enables filament assembly 1.1
fliE flagellar basal-body protein FliE 1.1
fliF flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein 1.1
fliG flagellar motor switch protein FliG 1.1
fliH flagellar biosynthesis protein FliH 1.1
fliI flagellum-specific ATP synthase FliI 1.1
fliJ flagellar biosynthesis protein FliJ 1.1
fliK flagellar hook-length control protein FliK 1.1
fliL flagellar biosynthesis 1.1
fliM flagellar motor switch protein FliM 1.1
fliN flagellar motor switch protein FliN 1.1
fliO flagellar biosynthesis protein FliO 1.1
fliP flagellar biosynthesis protein FliP 1.1
fliQ flagellar biosynthesis protein FliQ 1.1
fliR flagellar biosynthesis protein FliR 1.1
fliS flagellar biosynthesis protein FliS 1.1
fliT flagellar biosynthesis protein FliT 1.1
fliY periplasmic cystine-binding protein; member of extracellular bacterial solute-binding protein family III 1.1
fliZ FliZ DNA-binding transcriptional regulator 1.1
flu CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter 1.10
folA dihydrofolate reductase 1.26
folE GTP cyclohydrolase I monomer 1.4
fpr flavodoxin NADP+ reductase 1.2
frc formyl-CoA transferase monomer 1.1
frdA fumarate reductase flavoprotein 3
frdB fumarate reductase iron-sulfur protein 3
frdC fumarate reductase membrane protein 3
frdD fumarate reductase membrane protein 3
ftnB predicted ferritin-like protein 1.1
ftsI essential cell division protein FtsI; penicillin-binding protein 3 1.21
ftsK essential cell division protein FtsK 4
ftsL essential cell division protein FtsL 1.21
ftsW essential cell division protein FtsW; lipid II flippase 1.21
fumB fumarase B monomer 3
fumC fumarase C monomer 1.2
gadA glutamate decarboxylase A subunit 1.1
gadB glutamate decarboxylase B subunit 1.1
gadC glutamic acid:4-aminobutyrate antiporter 1.1
gadE GadE DNA-binding transcriptional activator 1.1
gadW GadW DNA-binding transcriptional dual regulator 1.1
gadX GadX DNA-binding transcriptional dual regulator 1.1
galR GalR DNA-binding transcriptional dual regulator 1.22
galS GalS DNA-binding transcriptional dual regulator 1.23
gapA glyceraldehyde 3-phosphate dehydrogenase-A monomer 1.1
gcl glyoxylate carboligase 9
gcvA GcvA DNA-binding transcriptional dual regulator 31
gcvH glycine cleavage system H protein 31
gcvP glycine decarboxylase 31
gcvT aminomethyltransferase 31
gdhA GdhA 2
glcC GlcC transcriptional dual regulator 1.32
glmS GlmS 1.5
glmU GlmU 1.5
glnA GlnA 1.30
glnG NtrC transcriptional dual regulator 1.30
glnH glutamine ABC transporter - periplasmic binding protein 1.30
glnL NtrB 1.30
glnP glutamine ABC transporter - membrane subunit 1.30
glnQ glutamine ABC transporter - ATP binding subunit 1.30
glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A 10
glpB anaerobic glycerol-3-phosphate dehydrogenase subunit B 10
glpC anaerobic glycerol-3-phosphate dehydrogenase subunit C 10
glpD GlpD 10
glpF GlpF 10
glpK GlpK 10
glpQ GlpQ 10
glpR GlpR DNA-binding transcriptional repressor 10
glpT glycerol-3-phosphate:phosphate antiporter 10
glpX fructose 1,6-bisphosphatase II 10
glrR GlrR DNA-binding transcriptional activator 64
gltI glutamate / aspartate ABC transporter - periplasmic binding protein 1.1
gltJ glutamate / aspartate ABC transporter - membrane subunit 1.1
gltK glutamate / aspartate ABC transporter - membrane subunit 1.1
gltL glutamate / aspartate ABC transporter - ATP binding subunit 1.1
glxK glycerate kinase II 9
glxR tartronate semialdehyde reductase 2 9
gmr cyclic di-GMP phosphodiesterase 1.1
gntK GntK 1.18
gntP gluconate / fructuronate transporter GntP 39
gntR GntR DNA-binding transcriptional repressor 1.18
gntT gluconate transporter GntT 1.18
gntU gluconate transporter GntU 1.18
grxA reduced glutaredoxin 1 1.10
guaA GMP synthetase 2
guaB GuaB 2
hcaB 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 26
hcaC 3-phenylpropionate dioxygenase, predicted ferredoxin subunit 26
hcaD 3-phenylpropionate dioxygenase, predicted ferredoxin reductase subunit 26
hcaE 3-phenylpropionate dioxygenase, α subunit 26
hcaF 3-phenylpropionate dioxygenase, β subunit 26
hcaR HcaR transcriptional dual regulator 26
hdeD acid-resistance membrane protein 1.1
hdfR HdfR DNA-binding transcriptional dual regulator 1.1
hemH ferrochelatase 1.10
hemL glutamate-1-semialdehyde aminotransferase 1.1
hflD lysogenization regulator 1.11
hha haemolysin expression modulating protein 1.1
hipA serine/threonine kinase HipA 65
hipB HipB 65
hisJ histidine ABC transporter - periplasmic binding protein 1.16
hisM lysine/arginine/ornithine ABC transporter / histidine ABC transporter - membrane subunit 1.16
hisP lysine / arginine / ornithine ABC transporter / histidine ABC transporter - ATP binding subunit 1.16
hisQ lysine / arginine / ornithine ABC transporter / histidine ABC transporter - membrane subunit 1.16
hlyE hemolysin E 68
hmp nitric oxide dioxygenase 1.4
hokD Qin prophage; small toxic polypeptide 38
hrsA -- 50
hslJ heat shock protein HslJ 5
htpG HtpG monomer 23
hupA transcriptional dual regulator HU-α (HU-2) 1.34
hupB transcriptional dual regulator HU-β, NS1 (HU-1) 1.34
hyaA hydrogenase 1, small subunit 1.20
hyaB hydrogenase 1, large subunit 1.20
hyaC hydrogenase 1, b-type cytochrome subunit 1.20
hyaD protein involved in processing of HyaA and HyaB proteins 1.20
hyaE protein involved in quality control of HyaA 1.20
hyaF protein involved in nickel incorporation into hydrogenase 1 proteins 1.20
hydN putative electron transport protein HydN 1.19
hyi -- 9
hypA accessory protein for nickel incorporation into hydrogenase 3 1.19
hypB accessory protein for nickel incorporation into hydrogenase isoenzymes 1.19
hypC HypC, protein involved in hydrogenase 3 maturation 1.19
hypD HypD, scaffold protein for assembly of the Fe-(CN)2CO cofactor 1.19
hypE hydrogenase maturation protein, carbamoyl dehydratase 1.19
hypT HypT transcriptional dual regulator 1.17
ibaG predicted DNA-binding transcriptional regulator 1.1
icd Icd 1.1
iclR IclR transcriptional repressor 1.3
ilvC -- 63
ilvY IlvY DNA-binding transcriptional dual regulator 63
inaA pH-inducible protein involved in stress response 1.2
infB protein chain initiation factor IF2 1.16
iraM inhibitor of σS proteolysis 1.1
iscA iron-sulfur cluster assembly protein 1.20
iscR IscR DNA-binding transcriptional dual regulator 1.20
iscS cysteine desulfurase monomer 1.20
iscU scaffold protein for iron-sulfur cluster assembly 1.20
katG hydroperoxidase I 1.10
kbaY KbaY 7
kbaZ -- 7
kdgR KdgR DNA-binding transcriptional repressor 1.31
kdpA K+ transporting ATPase - K+ channel forming subunit 30
kdpB K+ transporting ATPase - ATP binding subunit 30
kdpC K+ transporting ATPase - KdpC subunit 30
kdpE KdpE transcriptional activator 30
kdpF K+ transporting ATPase - KdpF subunit 30
lacA galactoside O-acetyltransferase monomer 34
lacI LacI DNA-binding transcriptional repressor 34
lacY lactose / melibiose:H+ symporter LacY 34
lacZ β-galactosidase monomer 34
lamB LamB 14
leuO LeuO DNA-binding transcriptional dual regulator 1.1
lexA LexA 4
lipA lipoate synthase monomer 1.21
lldD L-lactate dehydrogenase 49
lldP (R)-lactate / (S)-lactate / glycolate:H+ symporter LldP 49
lldR LldR transcriptional repressor 49
lpd E3 monomer 1.21
lpxC UDP-3-O-acyl-N-acetylglucosamine deacetylase 1.21
lrhA LrhA DNA-binding transcriptional dual regulator 1.1
lsrA AI-2 ABC transporter - ATP binding subunit 13
lsrB Autoinducer-2 ABC transporter - periplasmic binding protein 13
lsrC Autoinducer-2 ABC transporter - membrane subunit 13
lsrD Autoinducer-2 ABC transporter - membrane subunit 13
lsrF predicted class I aldolase 13
lsrG Autoinducer 2-degrading protein 13
lsrK autoinducer-2 kinase 13
lsrR LsrR 13
lysA LysA 2
lysC LysC 2
lysP lysine:H+ symporter 2
malE maltose ABC transporter - periplasmic binding protein 14
malF maltose ABC transporter - membrane subunit 14
malG maltose ABC transporter - membrane subunit 14
malI MalI DNA-binding transcriptional repressor 47
malK maltose ABC transporter - ATP binding subunit 14
malM maltose regulon periplasmic protein 14
malP maltodextrin phosphorylase monomer 14
malQ amylomaltase/amylomaltase/amylomaltase 14
malT MalT transcriptional activator 14
malX MalX PTS permease 47
malY bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon 47
marA MarA DNA-binding transcriptional dual regulator 1.2
marB multiple antibiotic resistance protein 1.2
marR MarR transcriptional repressor 1.2
mazE MazE antitoxin of the MazF-MazE toxin-antitoxin system 43
mazF MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity 43
mazG nucleoside triphosphate pyrophosphohydrolase 43
mcbA protein involved in colanic acid production 33
mcbR McbR DNA-binding transcriptional dual regulator 33
mdh malate dehydrogenase 3
mdtA MdtABC-TolC multidrug efflux transport system - putative membrane fusion protein 1.1
mdtB MdtABC-TolC multidrug efflux system - membrane subunit 1.1
mdtC MdtABC-TolC multidrug efflux system - membrane subunit 1.1
mdtD predicted transport protein MdtD 1.1
mdtE MdtEF-TolC multidrug efflux transport system - membrane fusion protein 1.1
mdtF MdtEF-TolC multidrug efflux transport system - permease subunit 1.1
melA α-galactosidase monomer 48
melB melibiose:H+/Na+/Li+ symporter 48
melR MelR DNA-binding transcriptional dual regulator 48
metA homoserine O-succinyltransferase 1.4
metC MetC 1.4
metE cobalamin-independent homocysteine transmethylase 1.4
metF 5,10-methylenetetrahydrofolate reductase 1.4
metI L-methionine / D-methionine ABC transporter - membrane subunit 1.17
metJ MetJ transcriptional repressor 1.4
metN L-methionine / D-methionine ABC transporter - ATP binding subunit 1.17
metQ L-methionine / D-methionine ABC transporter - periplasmic binding protein 1.17
metR MetR 1.4
mgrB negative feedback regulator of the PhoQP system 1.1
mgtA Mg2+ / Ni2+ transporting ATPase 1.1
mgtL predicted leader peptide 1.1
mhpA 3-(3-hydroxyphenyl)propionate 2-hydroxylase 19
mhpB 3-(2,3-dihydroxyphenyl)propionate dioxygenase monomer 19
mhpC 2-hydroxy-6-ketonona-2,4-dienedioate hydrolase 19
mhpD -- 19
mhpE 4-hydroxy-2-ketovalerate aldolase 19
mhpF acetaldehyde dehydrogenase 2 19
mhpR MhpR transcriptional activator 19
mlc Mlc DNA-binding transcriptional repressor 1.27
mlrA MlrA DNA binding transcriptional activator 1.1
mngB α-mannosidase 50
mngR MngR 50
mntR MntR 1.13
moaA molybdopterin biosynthesis protein A 1.15
moaB MoaB protein 1.15
moaC MoaC monomer 1.15
moaD molybdopterin synthase small subunit 1.15
moaE molybdopterin synthase large subunit 1.15
modA molybdate ABC transporter - periplasmic binding protein 1.15
modB molybdate ABC transporter - membrane subunit 1.15
modC molybdate ABC transporter - ATP binding subunit 1.15
modE ModE 1.15
motA MotA protein, proton conductor component of motor; no effect on switching 1.1
motB MotB protein, enables flagellar motor rotation, linking torque machinery to cell wall 1.1
mprA MprA 53
mqsA MqsA antitoxin of the MqsRA toxin-antitoxin system and DNA-binding transcriptional repressor 41
mqsR mRNA interferase, toxin of the MqsR-MqsA toxin-antitoxin system 41
mraY phospho-N-acetylmuramoyl-pentapeptide transferase 1.21
mraZ MraZ DNA-binding transcriptional repressor 1.21
mtlA MtlA 1.1
mtlD mannitol-1-phosphate 5-dehydrogenase 1.1
mtlR MtlR DNA-binding transcriptional repressor 1.1
murC UDP-N-acetylmuramate-alanine ligase 1.21
murD UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 1.21
murE UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase 1.21
murF D-alanyl-D-alanine-adding enzyme 1.21
murG N-acetylglucosaminyl transferase 1.21
murI glutamate racemase 1.1
murP N-acetylmuramic acid PTS permease / anhydro-N-acetylmuramic acid permease 56
murQ N-acetylmuramic acid 6-phosphate etherase 56
murR MurR 56
mzrA MzrA 1.1
nac Nac DNA-binding transcriptional dual regulator 54
nadB L-aspartate oxidase 67
nadR NadR DNA-binding transcriptional repressor and NMN adenylyltransferase 67
nagB glucosamine-6-phosphate deaminase 1.5
nagC NagC DNA-binding transcriptional dual regulator 1.5
nagE NagE 1.5
nanA N-acetylneuraminate lyase 1.7
nanE predicted N-acetylmannosamine-6-phosphate epimerase 1.7
nanK N-acetylmannosamine kinase 1.7
nanR NanR DNA-binding transcriptional dual regulator 1.7
nanT N-acetylneuraminate:H+ symporter 1.7
narP NarP 1.12
narX NarX 1.15
ndh NADH:ubiquinone oxidoreductase II 1.21
nemA N-ethylmaleimide reductase, FMN-linked 1.1
nemR NemR DNA-binding transcriptional repressor 1.1
nfsB NfsB monomer 1.2
nfuA iron-sulfur cluster scaffold protein 1.20
nhaA NhaA 1.6
nhaR NhaR transcriptional activator 1.6
nikA nickel ABC transporter - periplasmic binding protein 21
nikB nickel ABC transporter - membrane subunit 21
nikC nickel ABC transporter - membrane subunit 21
nikD nickel ABC transporter - ATP binding subunit 21
nikE nickel ABC transporter - ATP binding subunit 21
nikR NikR DNA-binding transcriptional repressor, Ni-binding 21
nirB nitrite reductase, large subunit 1.12
nirC nitrite transporter NirC 1.12
nirD nitrite reductase, small subunit 1.12
nlpA lipoprotein-28 1.1
nmpC outer membrane porin protein; locus of qsr prophage 1.1
norR NorR DNA-binding transcriptional dual regulator 51
norV flavorubredoxin 51
norW NADH:flavorubredoxin reductase 51
nrdA ribonucleoside diphosphate reductase 1, α subunit 2
nrdB ribonucleoside diphosphate reductase 1, β subunit, ferritin-like 2
nrdD ribonucleoside-triphosphate reductase 2
nrdE NrdE 2
nrdF NrdF 2
nrdG NrdG 2
nrdH glutaredoxin-like protein 2
nrdI flavodoxin involved in dimanganese-tyrosyl radical cofactor maintenance for ribonucleotide reductase 2
nrdR NrdR 2
nsrR NsrR 1.1
nupG nucleoside:H+ symporter NupG 1.33
nusA transcription termination/antitermination L factor 1.16
ompC OmpC 1.1
ompF OmpF 1.1
ompR OmpR 1.1
osmY hyperosmotically inducible periplasmic protein 1.1
oxyR OxyR DNA-binding transcriptional dual regulator 1.10
paaA ring 1,2-phenylacetyl-CoA epoxidase, monooxygenase subunit 6
paaB ring 1,2-phenylacetyl-CoA epoxidase subunit 6
paaC ring 1,2-phenylacetyl-CoA epoxidase, structural subunit 6
paaD phenylacetate degradation protein 6
paaE ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit 6
paaF predicted 2,3-dehydroadipyl-CoA hydratase 6
paaG predicted ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) 6
paaH 3-hydroxyadipyl-CoA dehydrogenase (NAD+) 6
paaI phenylacetyl-CoA thioesterase 6
paaJ β-ketoadipyl-CoA thiolase 6
paaK phenylacetate-CoA ligase 6
paaX PaaX 6
paaZ oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase 6
pck phosphoenolpyruvate carboxykinase (ATP) 1.1
pdhR PdhR DNA-binding transcriptional dual regulator 1.21
pepA aminopeptidase A/I 1.29
pfkA 6-phosphofructokinase-1 monomer 1.1
pgaA partially N-deacetylated poly-β-1,6-N-acetyl-D-glucosamine outer membrane porin 1.6
pgaB poly-β-1,6-N-acetyl-D-glucosamine N-deacetylase 1.6
pgaC poly-β-1,6-N-acetyl-D-glucosamine synthase - PgaC subunit 1.6
pgaD poly-β-1,6-N-acetyl-D-glucosamine synthase - PgaD subunit 1.6
pgk phosphoglycerate kinase 1.1
phnC phosphonate ABC transporter - ATP binding subunit 1.9
phnD phosphonate ABC transporter - periplasmic binding protein 1.9
phnE -- 1.9
phnE_2 phosphonate/organophosphate ester transporter (pseudogene) 1.9
phnF PhnF predicted transcriptional regulator 1.9
phnG PhnG subunit of methylphosphonate degradation complex 1.9
phnH PhnH subunit of methylphosphonate degradation complex 1.9
phnI PhnI subunit of methylphosphonate degradation complex 1.9
phnJ carbon-phosphorous lyase 1.9
phnK predicted carbon-phosphorous lyase subunit 1.9
phnL PhnL subunit of methylphosphonate degradation complex 1.9
phnM RPnTP hydrolase 1.9
phnN ribose 1,5-bisphosphokinase 1.9
phnO aminoalkylphosphonate N-acetyltransferase 1.9
phnP 5-phospho-α-D-ribosyl 1,2-cyclic phosphate phosphodiesterase 1.9
phoA PhoA 1.9
phoB PhoB transcriptional dual regulator 1.9
phoE PhoE 1.9
phoH ATP-binding protein 1.9
phoP PhoP 1.1
phoQ PhoQ sensory histidine kinase 1.1
phoR PhoR 1.9
phoU -- 1.9
pnp polynucleotide phosphorylase monomer 1.16
polA DNA polymerase I, 5' --> 3' polymerase, 5' --> 3' and 3' --> 5' exonuclease 2
polB DNA polymerase II 4
ppiD periplasmic folding chaperone 1.1
ppsA phosphoenolpyruvate synthetase 1.1
pqiA paraquat-inducible protein A 1.2
pqiB paraquat-inducible protein B 1.2
prpR PrpR DNA-binding transcriptional dual regulator 23
psiE predicted phosphate starvation-inducible protein 1.9
psiF conserved protein 1.9
pspA regulatory protein for the phage shock protein operon 18
pspB stimulates PspC-mediated transcriptional activation of the psp operon; antitoxin of a PspC-PspB toxin-antitoxin pair 18
pspC PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair 18
pspD peripheral inner membrane phage-shock protein 18
pspE thiosulfate sulfurtransferase 18
pspF PspF transcriptional dual regulator 18
pspG phage shock protein G 18
pstA phosphate ABC transporter - membrane subunit 1.9
pstB phosphate ABC transporter - ATP binding subunit 1.9
pstC phosphate ABC transporter - membrane subunit 1.9
pstS phosphate ABC transporter - periplasmic binding protein 1.9
purB adenylosuccinate lyase 1.11
purC PurC 1.11
purD phosphoribosylamine-glycine ligase 1.11
purF PurF 1.11
purH AICAR transformylase/IMP cyclohydrolase 1.11
purM PurM 1.11
purN phosphoribosylglycinamide formyltransferase 1 1.11
purR PurR 1.11
putA fused PutA transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase 1.1
putP proline:Na+ symporter 1.1
pykF pyruvate kinase I monomer 1.1
pyrC PyrC 1.11
qseB QseB transcriptional activator 59
qseC QseC sensory histidine kinase 59
rbfA 30S ribosome binding factor 1.16
rbsA ribose ABC transporter - putative ATP binding subunit 27
rbsB ribose ABC transporter - putative periplasmic binding protein 27
rbsC ribose ABC transporter - membrane subunit 27
rbsD ribose pyranase 27
rbsK ribokinase 27
rbsR RbsR DNA-binding transcriptional dual regulator 27
rcnA Ni2+ / Co2+ efflux transporter 45
rcnB periplasmic protein involved in nickel/cobalt efflux 45
rcnR RcnR DNA-binding transcriptional repressor 45
rcsA positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression 1.1
rcsB RcsB 1.1
rdoA serine/threonine protein kinase 1.1
recA DNA strand exchange and recombination protein with protease and nuclease activity 4
recF ssDNA and dsDNA binding, ATP binding 2
recN protein used in recombination and DNA repair 4
recX regulatory protein RecX; inhibitor of RecA 4
relB RelB Qin prophage; antitoxin of the RelE-RelB toxin-antitoxin system and DNA binding transcriptional repressor 38
relE Qin prophage; toxin of the RelE-RelB toxin-antitoxin system and cofactor to enhance the repressor activity of RelB 38
rhaA L-rhamnose isomerase 24
rhaB L-rhamnulose kinase 24
rhaD rhamnulose-1-phosphate aldolase monomer 24
rhaR RhaR transcriptional activator 24
rhaS RhaS 24
rhaT rhamnose / lyxose:H+ symporter 24
ribA GTP cyclohydrolase II 1.2
rimP ribosome maturation protein 1.16
rnlA CP4-57 prophage; RNase LS, toxin of the RnlAB toxin-antitoxin system 1.20
rob Rob DNA-binding transcriptional activator 1.2
rplU 50S ribosomal subunit protein L21 1.1
rpmA 50S ribosomal subunit protein L27 1.1
rpsO 30S ribosomal subunit protein S15 1.16
rpsU 30S ribosomal subunit protein S21 4
rsmH 16S rRNA m4C1402 methyltransferase 1.21
rstA RstA transcriptional regulator 1.1
rstB RstB sensory histidine kinase 1.1
rutA pyrimidine oxygenase 1.1
rutB peroxyureidoacrylate / ureidoacrylate amido hydrolase 1.1
rutC predicted aminoacrylate peracid reductase 1.1
rutD predicted aminoacrylate hydrolase 1.1
rutE predicted malonic semialdehyde reductase 1.1
rutF flavin reductase 1.1
rutG uracil:H+ symporter RutG 1.1
rutR RutR DNA-binding transcriptional dual regulator 1.1
ruvA branch migration of Holliday structures; repair 4
ruvB branch migration of Holliday structures; repair helicase 4
safA two-component system connector protein 1.1
sdiA SdiA DNA-binding transcriptional dual regulator 1.14
setA sugar / lactose efflux transporter SetA 12
sgrR SgrR DNA-binding transcriptional dual regulator 12
sgrT SgrT, regulator of PtsG activity 12
slp starvation lipoprotein 1.1
slyA SlyA DNA-binding transcriptional activator 68
slyB outer membrane lipoprotein 1.1
sodA SodA 1.2
soxR SoxR DNA-binding transcriptional dual regulator 1.2
soxS SoxS DNA-binding transcriptional dual regulator 1.2
spy -- 1.1
sra 30S ribosomal subunit protein S22 1.1
sroA SroA 12
sroC SroC 1.1
sroD SroD 1.3
ssuA aliphatic sulfonate ABC transporter - periplasmic binding protein 5
ssuB aliphatic sulfonate ABC transporter - ATP binding subunit 5
ssuC aliphatic sulfonate ABC transporter - membrane subunit 5
ssuD alkanesulfonate monooxygenase, FMNH2-dependent 5
ssuE NAD(P)H-dependent FMN reductase 5
symE toxin-like protein of the SOS response 4
tam trans-aconitate 2-methyltransferase 13
tap -- 1.1
tar -- 1.1
tauA taurine ABC transporter - periplasmic binding protein 5
tauB taurine ABC transporter - ATP binding subunit 5
tauC taurine ABC transporter - membrane subunit 5
tauD taurine dioxygenase monomer 5
tdcA TdcA DNA-binding transcriptional activator 16
tdcB TdcB 16
tdcC serine / threonine:H+ symporter TdcC 16
tdcD propionate kinase 16
tdcE 2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive 16
tdcF predicted enamine/imine deaminase 16
tdcG L-serine deaminase III 16
tdcR TdcR DNA-binding transcriptional activator 16
thiB -- 12
thiP thiamin ABC transporter - membrane subunit 12
thiQ thiamin ABC transporter - ATP binding subunit 12
tnaA tryptophanase 17
tnaB tryptophan:H+ symporter TnaB 17
tnaC tna operon leader peptide 17
tomB protein that modulates Hha toxicity 1.1
torA trimethylamine N-oxide reductase, catalytic subunit 17
torC TorC trimethylamine N-oxide reductase, cytochrome c-type subunit 17
torD chaperone protein for trimethylamine-N-oxide oxidoreductase I 17
torR TorR 17
treB trehalose PTS permease - TreB subunit 1.1
treC trehalose-6-phosphate hydrolase 1.1
treR TreR transcriptional repressor 1.1
trg -- 1.1
trpA tryptophan synthase, α subunit 1.24
trpB tryptophan synthase, β subunit 1.24
trpC indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1.24
trpD anthranilate synthase component II 1.24
trpE anthranilate synthase component I 1.24
trpL trp operon leader peptide 1.24
trpR TrpR 1.24
truB tRNA pseudouridine 55 synthase 1.16
trxC reduced thioredoxin 2 1.10
tsr -- 1.1
tsx nucleoside channel; receptor of phage T6 and colicin K 1.33
ttdA L-tartrate dehydratase, α subunit 40
ttdB L-tartrate dehydratase, β subunit 40
ttdR Dan 40
ttdT tartrate:succinate antiporter 40
tyrA TyrA 1.26
tyrB TyrB 1.26
tyrP tyrosine:H+ symporter TyrP 1.26
tyrR TyrR DNA-binding transcriptional dual regulator 1.26
ubiX 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG 1.11
udp Udp 1.33
ugpA glycerol-3-phosphate ABC transporter - membrane subunit 1.9
ugpB glycerol-3-phosphate ABC transporter - periplasmic binding protein 1.9
ugpC glycerol-3-phosphate ABC transporter - ATP binding subunit 1.9
ugpE glycerol-3-phosphate ABC transporter - membrane subunit 1.9
ugpQ glycerophosphodiester phosphodiesterase, cytosolic 1.9
uhpA UhpA transcriptional activator 66
uhpT hexose-6-phosphate:phosphate antiporter 66
ulaA L-ascorbate PTS permease - UlaA subunit 15
ulaB L-ascorbate PTS permease - UlaB subunit 15
ulaC L-ascorbate PTS permease 15
ulaD 3-keto-L-gulonate 6-phosphate decarboxylase 15
ulaE L-xylulose 5-phosphate 3-epimerase 15
ulaF L-ribulose 5-phosphate 4-epimerase 15
ulaG L-ascorbate 6-phosphate lactonase 15
ulaR UlaR DNA-binding transcriptional repressor 15
umpH UMP phosphatase 1.5
umuC SOS mutagenesis and repair 4
umuD SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC 4
ung uracil-DNA glycosylase 1.1
uspA universal stress global stress response regulator 1.3
uvrB DNA repair; excision nuclease subunit B 4
uxuA D-mannonate dehydratase 39
uxuB D-mannonate oxidoreductase 39
uxuR UxuR DNA-binding transcriptional repressor 39
ves conserved protein 1.1
waaY lipopolysaccharide core heptose (II) kinase 1.2
waaZ protein involved in KdoIII attachment during lipopolysaccharide core biosynthesis 1.2
wcaA predicted colanic acid biosynthesis glycosyl transferase 1.1
wcaB predicted colanic acid biosynthesis acyl transferase 1.1
wrbA NAD(P)H:quinone oxidoreductase 1.1
wza lipoprotein required for capsular polysaccharide translocation through the outer membrane 1.1
wzb protein-tyrosine phosphatase 1.1
wzc protein-tyrosine kinase 1.1
xylA XylA 22
xylB xylulokinase 22
xylF xylose ABC transporter - periplasmic binding protein 22
xylG xylose ABC transporter - ATP binding subunit 22
xylH xylose ABC transporter - membrane subunit 22
xylR XylR transcriptional activator 22
yafQ toxin of the YafQ-DinJ toxin-antitoxin system 42
yahA phosphodiesterase, c-di-GMP-specific 1.1
ybbW YbbW NCS1 Transporter 9
ybbY predicted uracil/xanthine transporter 9
ybfA predicted protein 1.1
ybiT putative ATP-binding component of a transport system 23
yccA putative carrier/transport protein; substrate or modulator of FtsH-mediated proteolysis 1.1
yccJ predicted protein 1.1
yccT conserved protein 1.1
ycfS L,D-transpeptidase YcfS 1.1
ycgZ predicted protein 29
yciE conserved protein 33
yciF putative structural protein 33
yciG predicted protein 33
ydeO YdeO DNA-binding transcriptional dual regulator 1.1
ydeP acid resistance protein 1.1
ydhT conserved protein 1.12
ydhU predicted cytochrome 1.12
ydhV predicted oxidoreductase 1.12
ydhW predicted protein 1.12
ydhX predicted 4Fe-4S ferredoxin-type protein 1.12
ydhY predicted 4Fe-4S ferredoxin-type protein 1.12
ydiU conserved protein 1.20
ydiV anti-FlhDC factor 1.14
ydjM predicted inner membrane protein regulated by LexA 4
yeaD conserved protein 1.1
yebE conserved inner membrane protein 1.1
yecR predicted protein 1.1
yefM YefM antitoxin of the YoeB-YefM toxin-antitoxin pair and DNA binding transcriptional repressor 61
yegR predicted protein 1.1
yehT YehT 60
yeiB conserved inner membrane protein 1.4
yfaE 2Fe-2S cluster-containing protein involved in diferric-tyrosyl radical cofactor maintenance 2
yfdX predicted protein 1.1
yhbS predicted acyltransferase with acyl-CoA N-acyltransferase domain 1.1
yhbT predicted lipid carrier protein 1.1
yhcH conserved protein 1.7
yhiM inner membrane protein with a role in acid resistance 1.1
yhjA predicted cytochrome C peroxidase 1.10
yjeV small protein 2
yjiY inner membrane protein - predicted transporter 60
yjjQ predicted DNA-binding transcriptional regulator 1.1
ymgA protein involved in biofilm formation 29
ymgC protein involved in biofilm formation 29
yoeB toxin of the YoeB-YefM toxin-antitoxin pair 61
yqhC YqhC DNA-binding transcriptional activator 46
yqhD NADPH-dependent aldehyde reductase 46
yqjA membrane transport protein; required for proton-motive force (PMF) dependent drug efflux 1.1
yrbL predicted protein 1.1
ytfE protein involved in repair of stress-damaged iron-sulfur clusters 1.1
zntA zinc, cadmium and lead efflux system 58
zntR ZntR transcriptional activator 58
znuA Zn2+ ABC transporter - periplasmic binding protein 37
znuB Zn2+ ABC transporter - membrane subunit 37
znuC Zn2+ ABC transporter - ATP binding subunit 37
zraP zinc homeostasis protein 52
zraR ZraR transcriptional activator 52
zraS ZraS sensory histidine kinase 52
zur Zur 37
zwf glucose 6-phosphate-1-dehydrogenase 1.2