Escherichia coli (strain SMS-3-5 / SECEC)

Basal machinery genes
Gene Product description
aceA isocitrate lyase
aceB malate synthase A
acnB aconitate hydratase 2
acsA acetate--CoA ligase
adhE aldehyde-alcohol dehydrogenase
aegA1 protein aegA
aldB aldehyde dehydrogenase B
alr1 alanine racemase
araB L-ribulokinase
caiB crotonobetainyl-CoA:carnitine CoA-transferase
caiD carnitinyl-CoA dehydratase
cirA colicin I receptor
cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase
cyaA adenylate cyclase, class I
cydA cytochrome d ubiquinol oxidase, subunit I
cydB1 cytochrome d ubiquinol oxidase, subunit II
cysK cysteine synthase A
dadA D-amino acid dehydrogenase, small subunit
dctA aerobic C4-dicarboxylate transport protein
dmsB_2 dimethylsulfoxide reductase, B subunit
dmsC1 anaerobic dimethyl sulfoxide reductase, C subunit
EcSMS35_1000 polysaccharide biosynthesis/export protein
EcSMS35_1004 putative colanic acid biosynthesis acetyltransferase wcaB
EcSMS35_2185 putative sulfonate ABC transporter, permease protein
EcSMS35_2217 putative formate transporter FocA
EcSMS35_2843 formate hydrogenlyase maturation protein
EcSMS35_3164 IS2 transposase orfA
EcSMS35_3165 IS2 transposase orfB
EcSMS35_3409 putative endoribonuclease L-PSP
EcSMS35_3941 putative L-lactate dehydrogenase operon regulatory protein LldR
EcSMS35_4247 hypothetical protein
envZ osmolarity sensor protein EnvZ
epd D-erythrose-4-phosphate dehydrogenase
fdnG formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing
fdnH formate dehydrogenase, nitrate-inducible, iron-sulfur subunit
fdnI formate dehydrogenase, gamma subunit
fixC protein FixC
frdA fumarate reductase, flavoprotein subunit
frdB fumarate reductase, iron-sulfur protein
frdC fumarate reductase, cytochrome b subunit
frdD fumarate reductase, D subunit
fruA PTS system, fructose-specific, IIBC component
fruB PTS system fructose-specific phosphotransferase enzyme IIA component
fruK 1-phosphofructokinase
fucA L-fuculose phosphate aldolase
fucO lactaldehyde reductase
glnA glutamine synthetase
glnL nitrogen regulation protein NR(II)
glpA anaerobic glycerol-3-phosphate dehydrogenase subunit, A
glpB anaerobic glycerol-3-phosphate dehydrogenase, subunit B
glpC sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit
gmd GDP-mannose 4,6-dehydratase
guaB inosine-5'-monophosphate dehydrogenase
gyrA DNA gyrase, A subunit
hmp flavohemoprotein
hupA DNA-binding protein HU-alpha
hupB DNA-binding protein HU-beta
hyaA nickel-dependent hydrogenase 1, small subunit
hyaB nickel-dependent hydrogenase 1, large subunit
hyaC Ni/Fe-hydrogenase 1 B-type cytochrome subunit HyaC
hyaD hydrogenase 1 maturation peptidase HyaD
hyaF hydrogenase-1 operon protein HyaF
hyb0 hydrogenase-2 small chain
hybA hydrogenase-2 electron transfer subunit
hybB Ni/Fe-hydrogenase 2 b-type cytochrome subunit
hybC hydrogenase-2, large subunit
hybD2 hydrogenase 2 maturation peptidase
hybE hydrogenase-2 operon protein HybE
hybG hydrogenase assembly chaperone HybG
hycA formate hydrogenlyase regulatory protein HycA
hycB formate hydrogenlyase, subunit B
hycC formate hydrogenlyase, subunit C
hycD formate hydrogenlyase, subunit D
hycE formate hydrogenlyase, subunit E
hycF formate hydrogenlyase, subunit F
hycG formate hydrogenlyase, subunit G
hycI hydrogenase maturation peptidase HycI
hypA1 hydrogenase nickel insertion protein HypA
icd isocitrate dehydrogenase, NADP-dependent
lacA galactoside O-acetyltransferase LacA
lacY lactose permease
lacZ beta-galactosidase
lldD L-lactate dehydrogenase (cytochrome)
lldP L-lactate permease
melB melibiose carrier protein
modA molybdate ABC transporter, periplasmic molybdate-binding protein
modB molybdate ABC transporter, permease protein
modC molybdate ABC transporter, ATP-binding protein
moeA molybdopterin biosynthesis protein MoeA
moeB molybdopterin synthase sulfurylase MoeB
mtlA PTS system, mannitol-specific IIABC component
mtlD mannitol-1-phosphate 5-dehydrogenase
mtlR mannitol operon repressor
napA periplasmic nitrate reductase, large subunit
napB periplasmic nitrate reductase, diheme cytochrome c subunit
napC cytochrome c-type protein napC
napD NapD protein
napG periplasmic nitrate reductase, NapG
napH periplasmic nitrate reductase, NapH
narK nitrite extrusion protein 1
nrfA formate-dependent cytochrome c nitrite reductase, c552 subunit
nrfB cytochrome c nitrite reductase, pentaheme subunit
nrfD nrfD protein
nrfE cytochrome c-type biogenesis protein NrfE
nudD GDP-mannose mannosyl hydrolase
ompR transcriptional regulatory protein OmpR
oxyR hydrogen peroxide-inducible genes activator
pckA phosphoenolpyruvate carboxykinase (ATP)
pfkA 6-phosphofructokinase
pflB1 formate acetyltransferase
pflB2 formate acetyltransferase
proP proline/betaine transporter
putA bifunctional protein PutA
putP sodium/proline symporter
pykF pyruvate kinase I
sbp sulfate-binding protein
secB protein-export chaperone SecB
ssuB ABC transporter, ATP-binding protein
ssuD alkanesulfonate monooxygenase, FMNH(2)-dependent
tdcA transcriptional regulator TdcA
tdcC threonine/serine transporter
tdcD propionate kinase
tdcG L-serine ammonia-lyase TdcG
wcaC colanic acid biosynthesis glycosyl transferase WcaC
wcaD colanic acid polymerase WcaD
wcaI colanic acid biosynthesis glycosyl transferase WcaI
wzb low molecular weight protein-tyrosine-phosphatase wzb
wzc tyrosine-protein kinase wzc