Escherichia coli O139:H28 (strain E24377A / ETEC)

Basal machinery genes
Gene Product description
aceA isocitrate lyase
aceB malate synthase
aceK bifunctional isocitrate dehydrogenase kinase/phosphatase protein
acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
acsA acetyl-CoA synthetase
adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase
aegA putative oxidoreductase Fe-S binding subunit
aldA aldehyde dehydrogenase A
aldB aldehyde dehydrogenase B
alr1 alanine racemase
araA L-arabinose isomerase
araB ribulokinase
araD L-ribulose-5-phosphate 4-epimerase
caiB crotonobetainyl-CoA:carnitine CoA-transferase
caiD carnitinyl-CoA dehydratase
cirA iron ABC transporter outer membrane protein
cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein
cyaA adenylate cyclase
cydA cytochrome d ubiquinol oxidase, subunit I
cydB cytochrome d ubiquinol oxidase, subunit II
cysG siroheme synthase
cysK cysteine synthase A
dadA D-amino acid dehydrogenase small subunit
dmsA anaerobic dimethyl sulfoxide reductase, A subunit
dmsB1 dimethylsulfoxide reductase, B subunit
dmsC1 anaerobic dimethyl sulfoxide reductase, C subunit
dnaJ chaperone protein DnaJ
dnaK molecular chaperone DnaK
EcE24377A_0394 insertion element IS2 transposase InsD
EcE24377A_0395 insertion sequence 2 OrfA protein
EcE24377A_1001 formate transporter
EcE24377A_1036 alkanesulfonate transporter permease subunit
EcE24377A_1051 aliphatic sulfonate ABC transporter periplasmic substrate-binding protein
EcE24377A_1052 NAD(P)H-dependent FMN reductase
EcE24377A_2347 putative colanic acid biosynthesis acetyltransferase WcaF
EcE24377A_2351 putative colanic acid biosynthesis acetyltransferase WcaB
EcE24377A_2355 polysaccharide biosynthesis/export protein
EcE24377A_2504 quinol dehydrogenase periplasmic component
EcE24377A_3006 formate hydrogenlyase maturation protein
EcE24377A_3467 hypothetical protein
EcE24377A_3587 hypothetical protein
EcE24377A_4108 DNA-binding transcriptional repressor LldR
eda keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
edd phosphogluconate dehydratase
envZ osmolarity sensor protein
epd erythrose 4-phosphate dehydrogenase
fcl GDP-L-fucose synthetase
fdnH formate dehydrogenase, nitrate-inducible, iron-sulfur subunit
fdnI formate dehydrogenase-N subunit gamma
fixC putative oxidoreductase FixC
frdA fumarate reductase flavoprotein subunit
frdB fumarate reductase iron-sulfur subunit
frdC fumarate reductase subunit C
frdD fumarate reductase subunit D
fruA fructose-specific PTS system IIBC component
fruB bifunctional fructose-specific PTS IIA/HPr protein
fruK 1-phosphofructokinase
fucA L-fuculose phosphate aldolase
fucO L-1,2-propanediol oxidoreductase
gapA giyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
glnA glutamine synthetase
glnL nitrogen regulation protein NR(II)
glpA sn-glycerol-3-phosphate dehydrogenase subunit A
glpB anaerobic glycerol-3-phosphate dehydrogenase subunit B
glpC sn-glycerol-3-phosphate dehydrogenase subunit C
gmd GDP-mannose 4,6-dehydratase
gntT high-affinity gluconate transporter
groL chaperonin GroEL
groS co-chaperonin GroES
grpE heat shock protein GrpE
guaA bifunctional GMP synthase/glutamine amidotransferase protein
guaB inositol-5-monophosphate dehydrogenase
gyrA DNA gyrase subunit A
hupA transcriptional regulator HU subunit alpha
hupB transcriptional regulator HU subunit beta
hyaA nickel-dependent hydrogenase, small subunit
hyaB hydrogenase 1 large subunit
hyaC hydrogenase 1 b-type cytochrome subunit
hyaD hydrogenase 1 maturation protease
hyaE hydrogenase-1 operon protein HyaE
hyaF hydrogenase-1 operon protein HyaF
hyb0 hydrogenase 2 small subunit
hybB putative hydrogenase 2 b cytochrome subunit
hybC hydrogenase 2 large subunit
hybD hydrogenase 2 maturation endopeptidase
hybE hydrogenase 2-specific chaperone
hybG hydrogenase 2 accessory protein HypG
hycA formate hydrogenlyase regulatory protein HycA
hycB formate hydrogenlyase, subunit B
hycC formate hydrogenlyase subunit 3
hycD formate hydrogenlyase, subunit D
hycE formate hydrogenlyase, subunit E
hycF formate hydrogenlyase complex iron-sulfur subunit
hycG formate hydrogenlyase, subunit G
hycI hydrogenase 3 maturation protease
ibpA heat shock protein IbpA
ibpB heat shock chaperone IbpB
icd isocitrate dehydrogenase
lacY galactoside permease
lacZ beta-D-galactosidase
lldD L-lactate dehydrogenase
lldP L-lactate permease
manC mannose-1-phosphate guanylyltransferase
modA molybdate transporter periplasmic protein
modB molybdate ABC transporter permease protein
modC molybdate transporter ATP-binding protein
modF putative molybdenum transport ATP-binding protein ModF
moeA molybdopterin biosynthesis protein MoeA
moeB molybdopterin biosynthesis protein MoeB
mtlA PTS system, mannitol-specific IIABC component
mtlD mannitol-1-phosphate 5-dehydrogenase
mtlR mannitol repressor protein
napA nitrate reductase
napB diheme cytochrome c550
napC cytochrome c-type protein NapC
napD assembly protein for periplasmic nitrate reductase
napH quinol dehydrogenase membrane component
narK nitrite extrusion protein 1
nirB nitrite reductase [NAD(P)H], large subunit
nirC nitrite transporter NirC
nirD nitrite reductase small subunit
nrfA cytochrome c nitrite reductase
nrfB cytochrome c-type protein NrfB
nrfC cytochrome c nitrite reductase, Fe-S protein
nrfD nrfD protein
nrfE heme lyase subunit NrfE
nrfF formate-dependent nitrite reductase complex subunit NrfF
nrfG formate-dependent nitrite reductase complex subunit NrfG
ompR osmolarity response regulator
oxyR DNA-binding transcriptional regulator OxyR
pckA phosphoenolpyruvate carboxykinase
pfkA 6-phosphofructokinase
pflB1 formate acetyltransferase
pflB2 formate acetyltransferase
proP proline/glycine betaine transporter
putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
putP sodium/proline symporter
pykF pyruvate kinase
sbp sulfate transporter subunit
secB preprotein translocase subunit SecB
ssuB aliphatic sulfonates transport ATP-binding subunit
ssuD alkanesulfonate monooxygenase
tdcA DNA-binding transcriptional activator TdcA
tdcB threonine dehydratase
tdcC threonine/serine transporter TdcC
tdcD propionate/acetate kinase
tdcG L-serine dehydratase tdcG
wcaC predicted glycosyl transferase
wcaD putative colanic acid biosynthesis protein
wcaI predicted glycosyl transferase
wzb tyrosine phosphatase
wzc tyrosine kinase
ybhA phosphotransferase