Bacillus subtilis (strain 168) (DBTBS, Strong evidences)

Basal machinery genes
Gene Product description
ackA acetate kinase
acoR acetoin dehydrogenase operon transcriptional activator AcoR
acsA acetyl-coenzyme A synthetase
acuA acetoin utilization protein AcuA
acuB acetoin utilization protein AcuB
acuC acetoin utilization protein AcuC
addA ATP-dependent helicase/nuclease subunit A
addB ATP-dependent helicase/deoxyribonuclease subunit B
ald alanine dehydrogenase
allB --
alr2 --
amhX amidohydrolase AmhX
antE protein AntE
asd aspartate-semialdehyde dehydrogenase
asnO asparagine synthetase 3
besA ferri-bacillibactin esterase BesA
bglC aryl-phospho-beta-d-glucosidase BglC
bmr multidrug resistance protein
bmrU lipid kinase BmrU
bsn extracellular ribonuclease
BSU05890 --
Bsu1630a --
BSU_misc_RNA_2 --
BSU_misc_RNA_41 --
BSU_rRNA_1 --
BSU_rRNA_19 --
BSU_rRNA_2 --
BSU_rRNA_20 --
BSU_rRNA_21 --
BSU_rRNA_26 --
BSU_rRNA_3 --
BSU_rRNA_4 --
BSU_rRNA_5 --
BSU_tRNA_29 --
BSU_tRNA_30 --
BSU_tRNA_31 --
BSU_tRNA_32 --
BSU_tRNA_33 --
BSU_tRNA_34 --
BSU_tRNA_35 --
BSU_tRNA_36 --
BSU_tRNA_39 --
BSU_tRNA_40 --
BSU_tRNA_42 --
BSU_tRNA_43 --
BSU_tRNA_44 --
BSU_tRNA_5 --
BSU_tRNA_52 --
BSU_tRNA_53 --
BSU_tRNA_54 --
BSU_tRNA_55 --
BSU_tRNA_57 --
BSU_tRNA_58 --
BSU_tRNA_59 --
BSU_tRNA_6 --
BSU_tRNA_60 --
BSU_tRNA_61 --
BSU_tRNA_62 --
BSU_tRNA_63 --
BSU_tRNA_64 --
BSU_tRNA_65 --
BSU_tRNA_66 --
BSU_tRNA_67 --
BSU_tRNA_68 --
BSU_tRNA_69 --
BSU_tRNA_70 --
BSU_tRNA_71 --
BSU_tRNA_72 --
BSU_tRNA_8 --
BSU_tRNA_9 --
btr --
ccdA cytochrome c-type biogenesis protein CcdA
ccdB --
ccdC --
cdd cytidine deaminase
cgeC spore maturation protein CgeC
cgeD spore maturation protein CgeD
cgeE N-acetyltransferase CgeE
cheA chemotaxis protein CheA
cheB chemotaxis response regulator protein-glutamate methylesterase
cheC Chey-P phosphatase CheC
cheD chemoreceptor glutamine deamidase CheD
cheV chemotaxis protein CheV
cheW chemotaxis protein CheW
cheY chemotaxis protein CheY
clpQ ATP-dependent protease subunit ClpQ
clpY --
comC type 4 prepilin-like proteins leader peptide-processing enzyme
comEA ComE operon protein 1
comEB ComE operon protein 2
comEC ComE operon protein 3
comFA ComF operon protein 1
comFB ComF operon protein 2
comFC ComF operon protein 3
comQ competence regulatory protein ComQ
comX competence pheromone
cotE spore coat protein E
cotF spore coat protein F
cotO spore coat protein O
cotS spore coat protein S
cotSA spore coat protein SA
cotT spore coat protein
coxA sporulation cortex protein CoxA
csbA general stress protein CsbA
csbC metabolite transport protein CsbC
csbD stress response protein CsbD
csbX alpha-ketoglutarate permease
cse15 --
cse60 --
csgA sigma-G-dependent sporulation-specific SASP protein
csk22 --
cspB cold shock protein CspB
ctaA heme A synthase
ctaB2 --
ctaC cytochrome c oxidase subunit 2
ctaD cytochrome c oxidase subunit 1
ctaE cytochrome c oxidase subunit 3
ctaF cytochrome c oxidase subunit 4B
ctaG cytochrome c oxidase assembly factor CtaG
ctc general stress protein CTC
ctpB carboxy-terminal processing protease CtpB
cwlC sporulation-specific N-acetylmuramoyl-L-alanine amidase
cwlJ cell wall hydrolase CwlJ
cysE serine acetyltransferase
cysK cysteine synthase
cysS cysteine--tRNA ligase
dacB D-alanyl-D-alanine carboxypeptidase DacB
dapA 4-hydroxy-tetrahydrodipicolinate synthase
dapG aspartokinase 1
degR regulatory protein DegR
degS signal transduction histidine-protein kinase/phosphatase DegS
dhbA 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
dhbB isochorismatase
dhbC isochorismate synthase DhbC
dhbE 2,3-dihydroxybenzoate-AMP ligase
dhbF dimodular nonribosomal peptide synthase
dpaA --
dpaB --
dps general stress protein 20U
drm phosphopentomutase
dtd --
efeM iron uptake system component EfeM
efeU ferrous iron permease EfeU
exoA 5'-3' exonuclease
ezrA septation ring formation regulator EzrA
fbp fructose-1,6-bisphosphatase
feuA iron-uptake system-binding protein
feuB iron-uptake system permease protein FeuB
feuC iron-uptake system permease protein FeuC
ffh signal recognition particle protein
fhuD iron(3+)-hydroxamate-binding protein FhuD
flgB flagellar basal body rod protein FlgB
flgC flagellar basal-body rod protein FlgC
flgG flagellar basal-body rod protein FlgG
flgK flagellar hook-associated protein 1
flgL flagellar hook-associated protein 3
flgM negative regulator of flagellin synthesis
flhA flagellar biosynthesis protein FlhA
flhB flagellar biosynthetic protein FlhB
flhF flagellar biosynthesis protein FlhF
flhO flagellar hook-basal body complex protein FlhO
flhP flagellar hook-basal body complex protein FlhP
fliD flagellar hook-associated protein 2
fliE flagellar hook-basal body complex protein FliE
fliF flagellar M-ring protein
fliG flagellar motor switch protein FliG
fliH flagellar assembly protein FliH
fliI flagellum-specific ATP synthase
fliJ flagellar FliJ protein
fliK flagellar hook-length control protein
fliL flagellar protein FliL
fliM flagellar motor switch protein FliM
fliP flagellar biosynthetic protein FliP
fliQ flagellar biosynthetic protein FliQ
fliR flagellar biosynthetic protein FliR
fliS flagellar protein FliS
fliT flagellar protein FliT
fliY flagellar motor switch phosphatase FliY
fliZ flagellar biosynthetic protein FliZ
folD bifunctional protein FolD
fosB --
ftsH ATP-dependent zinc metalloprotease FtsH
galE UDP-glucose 4-epimerase
gdh glucose 1-dehydrogenase
gerBA spore germination protein B1
gerBB spore germination protein B2
gerBC spore germination protein B3
gerD spore germination protein GerD
gerKA spore germination protein KA
gerKB spore germination protein KB
gerKC spore germination protein KC
gerQ --
ggaA minor teichoic acid biosynthesis protein GgaA
ggaB minor teichoic acid biosynthesis protein GgaB
glcP sugar transporter
glcR HTH-type transcriptional repressor GlcR
glcU glucose uptake protein GlcU
glgA glycogen synthase
glgB 1,4-alpha-glucan branching enzyme GlgB
glgC glucose-1-phosphate adenylyltransferase
glgD glycogen biosynthesis protein GlgD
glgP glycogen phosphorylase
glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
glpQ glycerophosphoryl diester phosphodiesterase
glpT glycerol-3-phosphate transporter
gltX glutamate--tRNA ligase
groL --
groS --
gsiB glucose starvation-inducible protein B
gspA general stress protein A
gtaB UTP--glucose-1-phosphate uridylyltransferase
guaA GMP synthase
guaC GMP reductase
guaD guanine deaminase
gudB cryptic catabolic NAD-specific glutamate dehydrogenase GudB
gyrA DNA gyrase subunit A
gyrB DNA gyrase subunit B
hemZ oxygen-independent coproporphyrinogen-III oxidase
htpG chaperone protein HtpG
htrA serine protease Do-like HtrA
infB translation initiation factor IF-2
iscS1 --
ispD 2-D-methyl-D-erythritol 4-phosphate cytidylyltransferase
ispF 2-D-methyl-D-erythritol 2,4-cyclodiphosphate synthase
jag protein jag
kapB kinase-associated lipoprotein B
katE catalase-2
kinB sporulation kinase B
lepA elongation factor 4
lrpC AsnC family transcriptional regulator
lysA diaminopimelate decarboxylase
lysC aspartokinase 2
lytD beta-N-acetylglucosaminidase
lytF peptidoglycan endopeptidase LytF
mapB --
mbl MreB-like protein
mcpC methyl-accepting chemotaxis protein McpC
mecA adapter protein MecA 1
med transcriptional activator protein med
menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
menC o-succinylbenzoate synthase
menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase
menE 2-succinylbenzoate--CoA ligase
menF menaquinone-specific isochorismate synthase
menH --
metC --
metI --
mgsR regulatory protein MgsR
mhqO --
misCA --
mmgA acetyl-CoA acetyltransferase
mmgB 3-hydroxybutyryl-CoA dehydrogenase
mmgC acyl-CoA dehydrogenase
mmgD 2-methylcitrate synthase
mnmA tRNA-specific 2-thiouridylase MnmA
mnmE --
mnmG --
motA motility protein A
motB motility protein B
mrnC mini-ribonuclease 3
mtnA methylthioribose-1-phosphate isomerase
mtnB methylthioribulose-1-phosphate dehydratase
mtnD acireductone dioxygenase
mtnE --
mtnK methylthioribose kinase
mtnU hydrolase
mtnW 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase
nadA quinolinate synthase A
nadB L-aspartate oxidase
nadC nicotinate-nucleotide pyrophosphorylase
nadE NH(3)-dependent NAD(+) synthetase
nadR transcription repressor NadR
nfo --
nfrA1 --
nifS cysteine desulfurase NifS
nin DNA-entry nuclease inhibitor
noc nucleoid occlusion protein
nrdE ribonucleoside-diphosphate reductase subunit alpha
nrdF ribonucleoside-diphosphate reductase subunit beta
nrdI ribonucleotide reductase stimulatory protein NrdI
ntdA NTD biosynthesis operon protein NtdA
ntdB NTD biosynthesis operon putative hydrolase NtdB
ntdC NTD biosynthesis operon putative oxidoreductase NtdC
nucA DNA-entry nuclease
nucB sporulation-specific extracellular nuclease
nusA transcription termination/antitermination protein NusA
nusB N utilization substance protein B homolog
obg --
odhA --
odhB dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
ogt methylated-dna--protein-cysteine methyltransferase
ohrB organic hydroperoxide resistance protein OhrB
opuAA glycine/betaine ABC transporter ATP-binding protein
opuAB glycine betaine transport system permease protein OpuAB
opuAC glycine betaine-binding protein OpuAC
opuBA choline transport ATP-binding protein OpuBA
opuBB choline transport system permease protein OpuBB
opuBC choline-binding protein
opuBD choline transport system permease protein OpuBD
opuE osmoregulated proline transporter
pabB para-aminobenzoate synthase component 1
pbpD penicillin-binding protein 4
pbpE penicillin-binding protein 4*
pbpF penicillin-binding protein 1F
pbpI penicillin-binding protein 4B
pbuG guanine/hypoxanthine permease PbuG
pbuO guanine/hypoxanthine permease PbuO
pbuX xanthine permease
pdhA pyruvate dehydrogenase E1 component subunit alpha
pdhB pyruvate dehydrogenase E1 component subunit beta
pdhC dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
pdhD dihydrolipoyl dehydrogenase
pheS phenylalanine--tRNA ligase alpha subunit
pheT phenylalanine--tRNA ligase beta subunit
phoB alkaline phosphatase 3
phoD alkaline phosphatase D
phoR alkaline phosphatase synthesis sensor protein PhoR
pmi --
ppiB peptidyl-prolyl cis-trans isomerase
prfB peptide chain release factor 2
prpB methylisocitrate lyase
prpD 2-methylcitrate dehydratase
prs ribose-phosphate pyrophosphokinase
pstB1 --
pstB2 --
pstS phosphate-binding protein PstS
pta --
pucF --
pucG purine catabolism protein PucG
pucI allantoin permease
pucJ uric acid permease PucJ
pucK uric acid permease PucK
pucL urate oxidase with peroxide reductase N-terminal domain
pucM 5-hydroxyisourate hydrolase
punA --
purA adenylosuccinate synthetase
purB adenylosuccinate lyase
purC phosphoribosylaminoimidazole-succinocarboxamide synthase
purD phosphoribosylamine--glycine ligase
purE N5-carboxyaminoimidazole ribonucleotide mutase
purF amidophosphoribosyltransferase
purH bifunctional purine biosynthesis protein PurH
purK N5-carboxyaminoimidazole ribonucleotide synthase
purL phosphoribosylformylglycinamidine synthase
purM phosphoribosylformylglycinamidine cyclo-ligase
purN phosphoribosylglycinamide formyltransferase
purQ phosphoribosylformylglycinamidine synthase
purS hypothetical protein
purT phosphoribosylglycinamide formyltransferase
pyrG CTP synthase
qcrA menaquinol-cytochrome c reductase iron-sulfur subunit
qcrB menaquinol-cytochrome c reductase cytochrome b subunit
qcrC menaquinol-cytochrome c reductase cytochrome b/c subunit
racX amino acid racemase
rapB response regulator aspartate phosphatase B
rbfA ribosome-binding factor A
rbsA ribose import ATP-binding protein RbsA
rbsB D-ribose-binding protein
rbsC ribose transport system permease RbsC
rbsD D-ribose pyranase
rbsK ribokinase
rbsR ribose operon repressor
recF DNA replication and repair protein RecF
relA GTP pyrophosphokinase
resA thiol-disulfide oxidoreductase ResA
resB cytochrome c biogenesis protein ResB
resC cytochrome c biogenesis protein ResC
resE sensor histidine kinase
ribBA --
ribD riboflavin biosynthesis protein RibD
ribE riboflavin synthase
ribH 6,7-dimethyl-8-ribityllumazine synthase
ribT --
rplGA --
rpmH 50S ribosomal protein L34
rpoB DNA-directed RNA polymerase subunit beta
rpsD 30S ribosomal protein S4
rpsF 30S ribosomal protein S6
rpsR 30S ribosomal protein S18
rsbRA RsbT co-antagonist protein RsbRA
rsbS RsbT antagonist protein RsbS
rsbT serine/threonine protein kinase
rsbU phosphoserine phosphatase RsbU
rsbV anti-sigma-B factor antagonist
rsbW serine-protein kinase RsbW
rsbX phosphoserine phosphatase RsbX
rsiW anti-sigma-W factor RsiW
rsmG --
safA spoivd-associated factor A
sbcC nuclease SbcCD subunit C
sbcD nuclease SbcCD subunit D
sdhA succinate dehydrogenase flavoprotein subunit
sdhB succinate dehydrogenase iron-sulfur subunit
sdhC succinate dehydrogenase cytochrome b558 subunit
secA protein translocase subunit SecA
sleB spore cortex-lytic enzyme
smf --
speB agmatinase
speE spermidine synthase
spmA spore maturation protein A
spmB spore maturation protein B
spo0B sporulation initiation phosphotransferase B
spo0E aspartyl-phosphate phosphatase Spo0E
spoIIIE spore DNA translocase
spoIVA stage IV sporulation protein A
spoIVFA stage IV sporulation protein FA
spoIVFB stage IV sporulation protein FB
spoVAA stage V sporulation protein AA
spoVAB stage V sporulation protein AB
spoVAC stage V sporulation protein AC
spoVAD stage V sporulation protein AD
spoVAEA stage V sporulation protein AE
spoVAF stage V sporulation protein AF
spoVID stage VI sporulation protein D
spoVK stage V sporulation protein K
spoVR stage V sporulation protein R
sppA signal peptide peptidase SppA
ssbB single-stranded DNA-binding protein SsbB
sspA small acid-soluble spore protein A
sspB small acid-soluble spore protein B
sspC small acid-soluble spore protein C
sspD small acid-soluble spore protein D
sspF small acid-soluble spore protein SspF
sspH small acid-soluble spore protein H
sspI small acid-soluble spore protein I
sspJ small acid-soluble spore protein J
sspK small acid-soluble spore protein K
sspL small acid-soluble spore protein L
sspM small acid-soluble spore protein M
sspO small acid-soluble spore protein O
sspP small acid-soluble spore protein P
swrB --
tagA N-acetylmannosaminyltransferase
tagB CDP-glycerol:glycerophosphate glycerophosphotransferase
tcyP L-cystine uptake protein TcyP
tetB tetracycline resistance protein
tetL --
thiE thiamine-phosphate synthase
thiM hydroxyethylthiazole kinase
tuaA --
tuaB teichuronic acid biosynthesis protein TuaB
tuaC teichuronic acid biosynthesis glycosyltransferase TuaC
tuaD UDP-glucose 6-dehydrogenase TuaD
tuaE teichuronic acid biosynthesis protein TuaE
tuaF teichuronic acid biosynthesis protein TuaF
tuaG teichuronic acid biosynthesis glycosyltransferase TuaG
tuaH teichuronic acid biosynthesis glycosyltransferase TuaH
txpA --
usd protein usd
veg protein Veg
vpr minor extracellular protease vpr
xerC tyrosine recombinase XerC
xpaC 5-bromo 4-chloroindolyl phosphate hydrolysis protein XpaC
xpt xanthine phosphoribosyltransferase
xynA endo-1,4-beta-xylanase A
xynB beta-xylosidase
yaaA hypothetical protein
yaaB hypothetical protein
yaaH spore germination protein YaaH
yaaN hypothetical protein
yabG sporulation-specific protease YabG
yabJ enamine/imine deaminase
yabP spore protein YabP
yabQ spore protein YabQ
yacL PIN and TRAM-domain containing protein YacL
yacO --
yacP hypothetical protein
ybbA hypothetical protein
ybdK sensor histidine kinase
ybfO hydrolase YbfO
ybxH hypothetical protein
yceC stress response protein SCP2
yceD general stress protein 16U
yceE hypothetical protein
yceF membrane protein
yceG hypothetical protein
yceH hypothetical protein
ycgT ferredoxin--NADP reductase 1
ychF --
yclN ABC transporter permease
yclO ABC transporter permease
yclP ABC transporter ATP-binding protein
yclQ ABC transporter substrate-binding protein
ydaD general stress protein 39
ydaE D-lyxose ketol-isomerase
ydaF ribosomal N-acetyltransferase YdaF
ydaG general stress protein 26
ydaP thiamine pyrophosphate-containing protein YdaP
ydbD manganese catalase
ydbN hypothetical protein
ydbS hypothetical protein
ydbT hypothetical protein
ydfK membrane protein
ydhD sporulation protein
ydhF hypothetical protein
ydjF --
ydjG hypothetical protein
ydjH hypothetical protein
ydjI hypothetical protein
ydjO hypothetical protein
ydjP AB hydrolase superfamily protein YdjP
yeaA hypothetical protein
yfhA siderophore transport system permease protein YfhA
yfhC NAD(P)H nitroreductase YfhC
yfhL hypothetical protein
yfhM AB hydrolase superfamily protein YfhM
yfhS hypothetical protein
yfiY siderophore-binding lipoprotein YfiY
yfiZ siderophore transport system permease protein YfiZ
yfkH ribonuclease-like protein YfkH
yfkI hypothetical protein
yfkJ low molecular weight protein-tyrosine-phosphatase YfkJ
yfkM general stress protein 18
yfkN nucleotide phosphoesterase
yflA transporter
yflH hypothetical protein
yfmC Fe(3+)-citrate-binding protein YfmC
yfmD Fe(3+)-citrate import system permease protein YfmD
yfmE Fe(3+)-citrate import system permease protein YfmE
yfmF Fe(3+)-citrate import ATP-binding protein YfmF
yfmO MFS transporter
yfmP MerR family transcriptional regulator
yhaX hydrolase
yhbH stress response UPF0229 protein YhbH
yhcE hypothetical protein
yhcF GntR family transcriptional regulator
yhcG spermidine/putrescine ABC transporter ATP-binding protein
yhcH ABC transporter ATP-binding protein
yhcI hypothetical protein
yhdF oxidoreductase
yhfQ ABC transporter substrate-binding protein
yhjB symporter
yisB hypothetical protein
yjbE membrane protein
yjcA sporulation protein YjcA
yjcB --
yjdB hypothetical protein
yjoB ATPase YjoB
yknW hypothetical protein
yknX efflux system component YknX
yknY ABC transporter ATP-binding protein
yknZ ABC transporter permease
ykuD L,D-transpeptidase YkuD
ykuN flavodoxin
ykuO hypothetical protein
ykuP flavodoxin-2
ykvP spore protein YkvP
ykvQ glycosylase YkvQ
ykvV --
yloB calcium-transporting ATPase
ylxF FlaA locus 22.9 kDa protein
ylxG --
ylxH flagellum site-determining protein YlxH
ylxM hypothetical protein
ylxP hypothetical protein
ylxR hypothetical protein
ymaB hypothetical protein
ynaJ --
yndA hypothetical protein
yndL hypothetical protein
yoaF hypothetical protein
yoaG hypothetical protein
yoaJ --
yoaW hypothetical protein
yobJ hypothetical protein
yozO hypothetical protein
ypeB sporulation protein YpeB
ypuE --
yqeZ hypothetical protein
yqfA hypothetical protein
yqfB hypothetical protein
yqfU hypothetical protein
yqgH --
yqgI --
yqxD hypothetical protein
yrrS membrane protein
ysdB sigma-W pathway protein YsdB
ysxA --
ysxE hypothetical protein
yteJ membrane protein
ythP ABC transporter ATP-binding protein
ythQ transporter
yttP TetR family transcriptional regulator
ytxO hypothetical protein
yuaF membrane protein
yuaG hypothetical protein
yuaI N-acetyltransferase YuaI
yusV siderophore transport system ATP-binding protein YusV
yuxH --
yuxK hypothetical protein
yuxO esterase ComA2
yvlA hypothetical protein
yvlB hypothetical protein
yvlC membrane protein
yvlD membrane protein
yvrN ABC transporter permease
yvrO ABC transporter ATP-binding protein
yvrP efflux system protein YvrP
yvyC hypothetical protein
yvyF hypothetical protein
yvyG hypothetical protein
ywaC GTP pyrophosphokinase YwaC
ywbI HTH-type transcriptional regulator YwbI
ywcH hypothetical protein
ywjA ABC transporter ATP-binding protein
ywjC hypothetical protein
ywmE hypothetical protein
ywrE hypothetical protein
ywtG metabolite transport protein YwtG
yxeB iron(3+)-hydroxamate-binding protein YxeB
yxeK monooxygenase YxeK
yxiS hypothetical protein
yxjI hypothetical protein
yxzE hypothetical protein